Protein–RNA interactions for Protein: Q02863

UBP16, Ubiquitin carboxyl-terminal hydrolase 16, yeastyeast

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP16Q02863 ZRG8YER033C 3231 nt2.17□□□□□ -2.06
UBP16Q02863 SLM1YIL105C 2061 nt2.16□□□□□ -2.06
UBP16Q02863 HDA3YPR179C 1968 nt2.16□□□□□ -2.06
UBP16Q02863 CSF1YLR087C 8877 nt2.16□□□□□ -2.06
UBP16Q02863 MET18YIL128W 3099 nt2.16□□□□□ -2.06
UBP16Q02863 NPC2YDL046W 522 nt2.16□□□□□ -2.06
UBP16Q02863 PCC1YKR095W-A 267 nt2.16□□□□□ -2.06
UBP16Q02863 YNL114CYNL114C 372 nt2.16□□□□□ -2.06
UBP16Q02863 VMR1YHL035C 4779 nt2.15□□□□□ -2.07
UBP16Q02863 NOP53YPL146C 1368 nt2.14□□□□□ -2.07
UBP16Q02863 CYC7YEL039C 342 nt2.14□□□□□ -2.07
UBP16Q02863 RPL42BYHR141C 321 nt2.14□□□□□ -2.07
UBP16Q02863 PAU8YAL068C 363 nt2.14□□□□□ -2.07
UBP16Q02863 UPS1YLR193C 528 nt2.14□□□□□ -2.07
UBP16Q02863 RPL42AYNL162W 321 nt2.14□□□□□ -2.07
UBP16Q02863 PAU20YOL161C 363 nt2.14□□□□□ -2.07
UBP16Q02863 YOR394C-AYOR394C-A 168 nt2.14□□□□□ -2.07
UBP16Q02863 SWI6YLR182W 2412 nt2.13□□□□□ -2.07
UBP16Q02863 SBE22YHR103W 2559 nt2.13□□□□□ -2.07
UBP16Q02863 PXA2YKL188C 2562 nt2.13□□□□□ -2.07
UBP16Q02863 FKS1YLR342W 5631 nt2.13□□□□□ -2.07
UBP16Q02863 IRA2YOL081W 9240 nt2.13□□□□□ -2.07
UBP16Q02863 YCR043CYCR043C 384 nt2.13□□□□□ -2.07
UBP16Q02863 HOP2YGL033W 657 nt2.13□□□□□ -2.07
UBP16Q02863 ALG13YGL047W 609 nt2.13□□□□□ -2.07
UBP16Q02863 YGR069WYGR069W 336 nt2.13□□□□□ -2.07
UBP16Q02863 YHR210CYHR210C 1026 nt2.13□□□□□ -2.07
UBP16Q02863 YKL183C-AYKL183C-A 213 nt2.13□□□□□ -2.07
UBP16Q02863 YLR154W-AYLR154W-A 186 nt2.13□□□□□ -2.07
UBP16Q02863 MNE1YOR350C 1992 nt2.12□□□□□ -2.07
UBP16Q02863 RPH1YER169W 2391 nt2.12□□□□□ -2.07
UBP16Q02863 YDL211CYDL211C 1119 nt2.12□□□□□ -2.07
UBP16Q02863 SPG3YDR504C 384 nt2.12□□□□□ -2.07
UBP16Q02863 TIM9YEL020W-A 264 nt2.12□□□□□ -2.07
UBP16Q02863 YHL042WYHL042W 453 nt2.12□□□□□ -2.07
UBP16Q02863 YIL032CYIL032C 357 nt2.12□□□□□ -2.07
UBP16Q02863 VPS8YAL002W 3825 nt2.11□□□□□ -2.07
UBP16Q02863 YDL118WYDL118W 381 nt2.11□□□□□ -2.07
UBP16Q02863 YGR265WYGR265W 411 nt2.11□□□□□ -2.07
UBP16Q02863 YPR063CYPR063C 423 nt2.11□□□□□ -2.07
UBP16Q02863 CFT1YDR301W 4074 nt2.11□□□□□ -2.07
UBP16Q02863 COG8YML071C 1824 nt2.1□□□□□ -2.07
UBP16Q02863 YDL062WYDL062W 426 nt2.1□□□□□ -2.07
UBP16Q02863 YDR426CYDR426C 378 nt2.1□□□□□ -2.07
UBP16Q02863 TRX1YLR043C 312 nt2.1□□□□□ -2.07
UBP16Q02863 RPS17AYML024W 411 nt2.1□□□□□ -2.07
UBP16Q02863 YOR008C-AYOR008C-A 225 nt2.1□□□□□ -2.07
UBP16Q02863 YPR002C-AYPR002C-A 198 nt2.1□□□□□ -2.07
UBP16Q02863 MUK1YPL070W 1839 nt2.1□□□□□ -2.07
UBP16Q02863 RGA1YOR127W 3024 nt2.09□□□□□ -2.07
UBP16Q02863 UBR1YGR184C 5853 nt2.09□□□□□ -2.07
UBP16Q02863 YGL188C-AYGL188C-A 141 nt2.09□□□□□ -2.07
UBP16Q02863 CFT2YLR115W 2580 nt2.09□□□□□ -2.07
UBP16Q02863 RAD61YDR014W 1944 nt2.09□□□□□ -2.08
UBP16Q02863 YHR073W-AYHR073W-A 177 nt2.08□□□□□ -2.08
UBP16Q02863 YMR141W-AYMR141W-A 225 nt2.08□□□□□ -2.08
UBP16Q02863 SWI5YDR146C 2130 nt2.08□□□□□ -2.08
UBP16Q02863 SEY1YOR165W 2331 nt2.07□□□□□ -2.08
UBP16Q02863 YEL020C-BYEL020C-B 198 nt2.07□□□□□ -2.08
UBP16Q02863 COA6YMR244C-A 315 nt2.07□□□□□ -2.08
UBP16Q02863 CCH1YGR217W 6120 nt2.06□□□□□ -2.08
UBP16Q02863 MCD1YDL003W 1701 nt2.06□□□□□ -2.08
UBP16Q02863 YGR250CYGR250C 2346 nt2.06□□□□□ -2.08
UBP16Q02863 RFX1YLR176C 2436 nt2.06□□□□□ -2.08
UBP16Q02863 SLY1YDR189W 2001 nt2.06□□□□□ -2.08
UBP16Q02863 INP2YMR163C 2118 nt2.06□□□□□ -2.08
UBP16Q02863 MVP1YMR004W 1536 nt2.06□□□□□ -2.08
UBP16Q02863 TRL1YJL087C 2484 nt2.05□□□□□ -2.08
UBP16Q02863 YCR102W-AYCR102W-A 198 nt2.05□□□□□ -2.08
UBP16Q02863 PAU18YLL064C 363 nt2.05□□□□□ -2.08
UBP16Q02863 CYB5YNL111C 363 nt2.05□□□□□ -2.08
UBP16Q02863 PAU6YNR076W 363 nt2.05□□□□□ -2.08
UBP16Q02863 TOF1YNL273W 3717 nt2.04□□□□□ -2.08
UBP16Q02863 tM(CAU)Q1tM(CAU)Q1 76 nt2.04□□□□□ -2.08
UBP16Q02863 snR49snR49 165 nt2.04□□□□□ -2.08
UBP16Q02863 LYS14YDR034C 2373 nt2.03□□□□□ -2.08
UBP16Q02863 TFC8YPL007C 1767 nt2.03□□□□□ -2.08
UBP16Q02863 SCW11YGL028C 1629 nt2.03□□□□□ -2.08
UBP16Q02863 JLP2YMR132C 627 nt2.03□□□□□ -2.08
UBP16Q02863 IST2YBR086C 2841 nt2.03□□□□□ -2.09
UBP16Q02863 PLC1YPL268W 2610 nt2.03□□□□□ -2.09
UBP16Q02863 snR60snR60 104 nt2.02□□□□□ -2.09
UBP16Q02863 YKL165C-AYKL165C-A 234 nt2.02□□□□□ -2.09
UBP16Q02863 CDC60YPL160W 3273 nt2.02□□□□□ -2.09
UBP16Q02863 YDR341CYDR341C 1824 nt2.01□□□□□ -2.09
UBP16Q02863 LCD1YDR499W 2244 nt2.01□□□□□ -2.09
UBP16Q02863 snR80snR80 171 nt2.01□□□□□ -2.09
UBP16Q02863 SDH2YLL041C 801 nt2.01□□□□□ -2.09
UBP16Q02863 YCL046WYCL046W 324 nt2.01□□□□□ -2.09
UBP16Q02863 CAT8YMR280C 4302 nt2□□□□□ -2.09
UBP16Q02863 YHR180W-AYHR180W-A 183 nt2□□□□□ -2.09
UBP16Q02863 HUG1YML058W-A 207 nt2□□□□□ -2.09
UBP16Q02863 RPB10YOR210W 213 nt2□□□□□ -2.09
UBP16Q02863 USO1YDL058W 5373 nt2□□□□□ -2.09
UBP16Q02863 ZRG17YNR039C 1818 nt2□□□□□ -2.09
UBP16Q02863 HCS1YKL017C 2052 nt2□□□□□ -2.09
UBP16Q02863 TOR2YKL203C 7425 nt2□□□□□ -2.09
UBP16Q02863 BUD2YKL092C 3315 nt1.99□□□□□ -2.09
UBP16Q02863 YHR071C-AYHR071C-A 321 nt1.99□□□□□ -2.09
UBP16Q02863 YBR064WYBR064W 429 nt1.99□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms