Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.87■□□□□ 0.13
CCL20P78556 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCL20P78556 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.87■□□□□ 0.13
CCL20P78556 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.87■□□□□ 0.13
CCL20P78556 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.87■□□□□ 0.13
CCL20P78556 ATP5G2P3-201ENST00000429083 425 ntBASIC15.87■□□□□ 0.13
CCL20P78556 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.87■□□□□ 0.13
CCL20P78556 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.87■□□□□ 0.13
CCL20P78556 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.87■□□□□ 0.13
CCL20P78556 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CCL20P78556 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 AL133373.2-201ENST00000623187 2828 ntBASIC15.87■□□□□ 0.13
CCL20P78556 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.87■□□□□ 0.13
CCL20P78556 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.87■□□□□ 0.13
CCL20P78556 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCL20P78556 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.86■□□□□ 0.13
CCL20P78556 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.86■□□□□ 0.13
CCL20P78556 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CCL20P78556 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.86■□□□□ 0.13
CCL20P78556 AC092028.1-203ENST00000608262 953 ntBASIC15.86■□□□□ 0.13
CCL20P78556 AL117332.1-201ENST00000622628 974 ntBASIC15.86■□□□□ 0.13
CCL20P78556 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.86■□□□□ 0.13
CCL20P78556 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.86■□□□□ 0.13
CCL20P78556 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CCL20P78556 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCL20P78556 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCL20P78556 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.86■□□□□ 0.13
CCL20P78556 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.86■□□□□ 0.13
CCL20P78556 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCL20P78556 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCL20P78556 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.85■□□□□ 0.13
CCL20P78556 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.85■□□□□ 0.13
CCL20P78556 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCL20P78556 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCL20P78556 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 LINC01465-201ENST00000408887 1940 ntBASIC15.85■□□□□ 0.13
CCL20P78556 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCL20P78556 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCL20P78556 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CCL20P78556 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCL20P78556 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCL20P78556 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.84■□□□□ 0.13
CCL20P78556 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
CCL20P78556 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCL20P78556 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCL20P78556 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCL20P78556 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCL20P78556 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.84■□□□□ 0.13
CCL20P78556 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.84■□□□□ 0.13
CCL20P78556 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCL20P78556 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms