Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.91■□□□□ 0.78
SRP54P61011 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRP54P61011 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SRP54P61011 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.91■□□□□ 0.78
SRP54P61011 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRP54P61011 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.91■□□□□ 0.78
SRP54P61011 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.91■□□□□ 0.78
SRP54P61011 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.91■□□□□ 0.78
SRP54P61011 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.91■□□□□ 0.78
SRP54P61011 AC120498.8-201ENST00000614275 531 ntBASIC19.91■□□□□ 0.78
SRP54P61011 FAM197Y4-202ENST00000622692 608 ntBASIC19.91■□□□□ 0.78
SRP54P61011 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SRP54P61011 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.91■□□□□ 0.78
SRP54P61011 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRP54P61011 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRP54P61011 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRP54P61011 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SRP54P61011 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SRP54P61011 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SRP54P61011 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SRP54P61011 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.9■□□□□ 0.78
SRP54P61011 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.9■□□□□ 0.78
SRP54P61011 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.9■□□□□ 0.78
SRP54P61011 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.9■□□□□ 0.78
SRP54P61011 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.9■□□□□ 0.78
SRP54P61011 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SRP54P61011 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.9■□□□□ 0.78
SRP54P61011 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SRP54P61011 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRP54P61011 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRP54P61011 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRP54P61011 UBE2SP1-201ENST00000450587 669 ntBASIC19.89■□□□□ 0.77
SRP54P61011 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.89■□□□□ 0.77
SRP54P61011 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.89■□□□□ 0.77
SRP54P61011 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRP54P61011 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
SRP54P61011 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.89■□□□□ 0.77
SRP54P61011 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SRP54P61011 AF106564.1-201ENST00000607058 2553 ntBASIC19.89■□□□□ 0.77
SRP54P61011 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.88■□□□□ 0.77
SRP54P61011 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.88■□□□□ 0.77
SRP54P61011 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SRP54P61011 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.88■□□□□ 0.77
SRP54P61011 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.88■□□□□ 0.77
SRP54P61011 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.88■□□□□ 0.77
SRP54P61011 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.88■□□□□ 0.77
SRP54P61011 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SRP54P61011 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
SRP54P61011 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
SRP54P61011 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SRP54P61011 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SRP54P61011 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SRP54P61011 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRP54P61011 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.87■□□□□ 0.77
SRP54P61011 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.87■□□□□ 0.77
SRP54P61011 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRP54P61011 PLK5-205ENST00000642079 1969 ntBASIC19.87■□□□□ 0.77
SRP54P61011 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRP54P61011 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.87■□□□□ 0.77
SRP54P61011 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.87■□□□□ 0.77
SRP54P61011 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.87■□□□□ 0.77
SRP54P61011 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.87■□□□□ 0.77
SRP54P61011 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.87■□□□□ 0.77
SRP54P61011 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SRP54P61011 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRP54P61011 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SRP54P61011 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRP54P61011 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRP54P61011 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SRP54P61011 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.87■□□□□ 0.77
SRP54P61011 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SRP54P61011 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.87■□□□□ 0.77
SRP54P61011 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.87■□□□□ 0.77
SRP54P61011 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SRP54P61011 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRP54P61011 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRP54P61011 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.86■□□□□ 0.77
SRP54P61011 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms