Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HLA-G-203ENST00000376818 1127 ntBASIC18.29■□□□□ 0.52
SUMO3P55854 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.29■□□□□ 0.52
SUMO3P55854 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
SUMO3P55854 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.29■□□□□ 0.52
SUMO3P55854 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.29■□□□□ 0.52
SUMO3P55854 KRT8P20-201ENST00000423953 1409 ntBASIC18.29■□□□□ 0.52
SUMO3P55854 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.29■□□□□ 0.52
SUMO3P55854 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.29■□□□□ 0.52
SUMO3P55854 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 AL512408.1-201ENST00000569378 2000 ntBASIC18.28■□□□□ 0.52
SUMO3P55854 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.28■□□□□ 0.52
SUMO3P55854 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
SUMO3P55854 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SUMO3P55854 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 AL355802.2-201ENST00000402069 882 ntBASIC18.28■□□□□ 0.52
SUMO3P55854 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SUMO3P55854 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.28■□□□□ 0.52
SUMO3P55854 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.28■□□□□ 0.52
SUMO3P55854 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.28■□□□□ 0.52
SUMO3P55854 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.28■□□□□ 0.52
SUMO3P55854 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.28■□□□□ 0.52
SUMO3P55854 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.28■□□□□ 0.52
SUMO3P55854 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.28■□□□□ 0.52
SUMO3P55854 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SUMO3P55854 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SUMO3P55854 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.27■□□□□ 0.52
SUMO3P55854 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SUMO3P55854 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.27■□□□□ 0.52
SUMO3P55854 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SUMO3P55854 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SUMO3P55854 SMG8-203ENST00000578922 2178 ntBASIC18.27■□□□□ 0.52
SUMO3P55854 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMO3P55854 KRT8P17-201ENST00000453110 1448 ntBASIC18.27■□□□□ 0.52
SUMO3P55854 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMO3P55854 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMO3P55854 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMO3P55854 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SUMO3P55854 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.27■□□□□ 0.52
SUMO3P55854 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.27■□□□□ 0.51
SUMO3P55854 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SUMO3P55854 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SUMO3P55854 AC092667.1-201ENST00000434301 2586 ntBASIC18.27■□□□□ 0.51
SUMO3P55854 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SUMO3P55854 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SUMO3P55854 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.26■□□□□ 0.51
SUMO3P55854 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SUMO3P55854 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SUMO3P55854 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMO3P55854 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMO3P55854 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMO3P55854 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.26■□□□□ 0.51
SUMO3P55854 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.26■□□□□ 0.51
SUMO3P55854 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.26■□□□□ 0.51
SUMO3P55854 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SUMO3P55854 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SUMO3P55854 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMO3P55854 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.26■□□□□ 0.51
SUMO3P55854 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMO3P55854 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMO3P55854 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.25■□□□□ 0.51
SUMO3P55854 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.25■□□□□ 0.51
SUMO3P55854 AC098934.4-201ENST00000564127 592 ntBASIC18.25■□□□□ 0.51
SUMO3P55854 HLA-B-256ENST00000639848 1089 ntBASIC18.25■□□□□ 0.51
SUMO3P55854 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMO3P55854 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.25■□□□□ 0.51
SUMO3P55854 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms