Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDH12P55289 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH12P55289 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH12P55289 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDH12P55289 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH12P55289 AC116562.4-201ENST00000641316 2276 ntBASIC18.75■□□□□ 0.59
CDH12P55289 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH12P55289 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDH12P55289 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH12P55289 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CDH12P55289 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH12P55289 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH12P55289 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 AC116050.2-201ENST00000612102 1779 ntBASIC18.74■□□□□ 0.59
CDH12P55289 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH12P55289 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH12P55289 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CDH12P55289 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH12P55289 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.74■□□□□ 0.59
CDH12P55289 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH12P55289 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH12P55289 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.73■□□□□ 0.59
CDH12P55289 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH12P55289 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDH12P55289 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH12P55289 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH12P55289 AC125437.2-201ENST00000625180 2167 ntBASIC18.73■□□□□ 0.59
CDH12P55289 AL158211.5-201ENST00000623583 2518 ntBASIC18.73■□□□□ 0.59
CDH12P55289 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH12P55289 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDH12P55289 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH12P55289 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH12P55289 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH12P55289 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CDH12P55289 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CDH12P55289 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDH12P55289 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH12P55289 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.72■□□□□ 0.59
CDH12P55289 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH12P55289 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH12P55289 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH12P55289 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH12P55289 KRT18P61-201ENST00000585825 1298 ntBASIC18.72■□□□□ 0.59
CDH12P55289 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH12P55289 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDH12P55289 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH12P55289 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH12P55289 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH12P55289 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
CDH12P55289 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH12P55289 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDH12P55289 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH12P55289 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH12P55289 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH12P55289 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH12P55289 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH12P55289 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDH12P55289 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH12P55289 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH12P55289 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH12P55289 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH12P55289 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH12P55289 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms