Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDH8P55286 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDH8P55286 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 PTBP1P-201ENST00000554374 1601 ntBASIC21.55■■□□□ 1.04
CDH8P55286 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH8P55286 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDH8P55286 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH8P55286 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH8P55286 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH8P55286 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH8P55286 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDH8P55286 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDH8P55286 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.54■■□□□ 1.04
CDH8P55286 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH8P55286 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH8P55286 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH8P55286 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH8P55286 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.54■■□□□ 1.04
CDH8P55286 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.54■■□□□ 1.04
CDH8P55286 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDH8P55286 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH8P55286 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH8P55286 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH8P55286 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH8P55286 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CDH8P55286 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CDH8P55286 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH8P55286 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH8P55286 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH8P55286 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 AL512408.1-201ENST00000569378 2000 ntBASIC21.53■■□□□ 1.04
CDH8P55286 AC092368.3-202ENST00000574180 1591 ntBASIC21.53■■□□□ 1.04
CDH8P55286 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH8P55286 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH8P55286 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH8P55286 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
CDH8P55286 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
CDH8P55286 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDH8P55286 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.53■■□□□ 1.04
CDH8P55286 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.53■■□□□ 1.04
CDH8P55286 AC060766.5-201ENST00000590539 871 ntBASIC21.53■■□□□ 1.04
CDH8P55286 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDH8P55286 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH8P55286 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CDH8P55286 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 MIR4651-201ENST00000582622 73 ntBASIC21.52■■□□□ 1.04
CDH8P55286 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH8P55286 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH8P55286 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CDH8P55286 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CDH8P55286 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.52■■□□□ 1.03
CDH8P55286 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDH8P55286 GABARAPL3-202ENST00000624044 1851 ntBASIC21.52■■□□□ 1.03
CDH8P55286 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.51■■□□□ 1.03
CDH8P55286 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CDH8P55286 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CDH8P55286 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH8P55286 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.51■■□□□ 1.03
CDH8P55286 PNMA6B-201ENST00000538162 1200 ntBASIC21.51■■□□□ 1.03
CDH8P55286 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CDH8P55286 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CDH8P55286 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CDH8P55286 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
CDH8P55286 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH8P55286 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH8P55286 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH8P55286 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH8P55286 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDH8P55286 AL391422.3-201ENST00000603791 2761 ntBASIC21.5■■□□□ 1.03
CDH8P55286 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CDH8P55286 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH8P55286 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH8P55286 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH8P55286 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms