Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC25A1P53007 CYP21A1P-202ENST00000354927 1481 ntBASIC17.93■□□□□ 0.46
SLC25A1P53007 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC25A1P53007 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC25A1P53007 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC25A1P53007 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC25A1P53007 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC25A1P53007 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC25A1P53007 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
SLC25A1P53007 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.92■□□□□ 0.46
SLC25A1P53007 AC007322.4-201ENST00000509611 723 ntBASIC17.92■□□□□ 0.46
SLC25A1P53007 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC25A1P53007 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC25A1P53007 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC25A1P53007 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC25A1P53007 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC25A1P53007 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC25A1P53007 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC25A1P53007 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SLC25A1P53007 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC25A1P53007 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC25A1P53007 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC25A1P53007 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC25A1P53007 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC25A1P53007 NTF6G-201ENST00000591094 616 ntBASIC17.91■□□□□ 0.46
SLC25A1P53007 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SLC25A1P53007 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC25A1P53007 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC25A1P53007 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC25A1P53007 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SLC25A1P53007 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC25A1P53007 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.9■□□□□ 0.46
SLC25A1P53007 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC25A1P53007 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SLC25A1P53007 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC25A1P53007 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC25A1P53007 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.89■□□□□ 0.46
SLC25A1P53007 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC25A1P53007 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC25A1P53007 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC25A1P53007 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SLC25A1P53007 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC25A1P53007 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC25A1P53007 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC25A1P53007 AC013268.1-206ENST00000638368 961 ntBASIC17.89■□□□□ 0.45
SLC25A1P53007 AC112229.1-201ENST00000639295 961 ntBASIC17.89■□□□□ 0.45
SLC25A1P53007 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC25A1P53007 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLC25A1P53007 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLC25A1P53007 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC25A1P53007 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC25A1P53007 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC25A1P53007 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC25A1P53007 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.88■□□□□ 0.45
SLC25A1P53007 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC25A1P53007 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SLC25A1P53007 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms