Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGA2P52926 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGA2P52926 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGA2P52926 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGA2P52926 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HMGA2P52926 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 TNXA-203ENST00000507684 2038 ntBASIC18.41■□□□□ 0.54
HMGA2P52926 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGA2P52926 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HMGA2P52926 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGA2P52926 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGA2P52926 AC009237.14-201ENST00000609975 1594 ntBASIC18.41■□□□□ 0.54
HMGA2P52926 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.41■□□□□ 0.54
HMGA2P52926 AC019069.1-201ENST00000610008 1333 ntBASIC18.41■□□□□ 0.54
HMGA2P52926 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGA2P52926 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGA2P52926 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 Z82202.1-201ENST00000623446 1880 ntBASIC18.4■□□□□ 0.54
HMGA2P52926 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGA2P52926 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 AC123595.1-201ENST00000440769 1046 ntBASIC18.4■□□□□ 0.54
HMGA2P52926 CDV3P1-201ENST00000471403 739 ntBASIC18.4■□□□□ 0.54
HMGA2P52926 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.4■□□□□ 0.54
HMGA2P52926 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGA2P52926 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGA2P52926 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGA2P52926 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HMGA2P52926 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.39■□□□□ 0.54
HMGA2P52926 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.39■□□□□ 0.54
HMGA2P52926 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.39■□□□□ 0.54
HMGA2P52926 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HMGA2P52926 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
HMGA2P52926 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HMGA2P52926 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGA2P52926 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HMGA2P52926 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGA2P52926 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HMGA2P52926 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HMGA2P52926 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGA2P52926 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HMGA2P52926 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.39■□□□□ 0.53
HMGA2P52926 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGA2P52926 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.39■□□□□ 0.53
HMGA2P52926 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.39■□□□□ 0.53
HMGA2P52926 TERF1P2-201ENST00000583350 1212 ntBASIC18.39■□□□□ 0.53
HMGA2P52926 AL139246.5-201ENST00000606645 996 ntBASIC18.39■□□□□ 0.53
HMGA2P52926 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.39■□□□□ 0.53
HMGA2P52926 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGA2P52926 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGA2P52926 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGA2P52926 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGA2P52926 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGA2P52926 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGA2P52926 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HMGA2P52926 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGA2P52926 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMGA2P52926 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGA2P52926 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGA2P52926 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.38■□□□□ 0.53
HMGA2P52926 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMGA2P52926 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGA2P52926 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGA2P52926 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGA2P52926 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGA2P52926 PGM5P4-201ENST00000421970 445 ntBASIC18.38■□□□□ 0.53
HMGA2P52926 AC097381.1-201ENST00000429019 1296 ntBASIC18.38■□□□□ 0.53
HMGA2P52926 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGA2P52926 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGA2P52926 AC142381.2-201ENST00000566120 298 ntBASIC18.38■□□□□ 0.53
HMGA2P52926 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGA2P52926 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms