Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
HCFC1P51610 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1P51610 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1P51610 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1P51610 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HCFC1P51610 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.67■□□□□ 0.42
HCFC1P51610 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.67■□□□□ 0.42
HCFC1P51610 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.67■□□□□ 0.42
HCFC1P51610 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.67■□□□□ 0.42
HCFC1P51610 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.67■□□□□ 0.42
HCFC1P51610 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.67■□□□□ 0.42
HCFC1P51610 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.67■□□□□ 0.42
HCFC1P51610 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.67■□□□□ 0.42
HCFC1P51610 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HCFC1P51610 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 AC124283.5-201ENST00000624661 1809 ntBASIC17.67■□□□□ 0.42
HCFC1P51610 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1P51610 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HCFC1P51610 TMPOP1-202ENST00000424642 1267 ntBASIC17.66■□□□□ 0.42
HCFC1P51610 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.66■□□□□ 0.42
HCFC1P51610 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.66■□□□□ 0.42
HCFC1P51610 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.66■□□□□ 0.42
HCFC1P51610 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.66■□□□□ 0.42
HCFC1P51610 CD177P1-201ENST00000606252 935 ntBASIC17.66■□□□□ 0.42
HCFC1P51610 REXO1L10P-201ENST00000615707 1290 ntBASIC17.66■□□□□ 0.42
HCFC1P51610 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.66■□□□□ 0.42
HCFC1P51610 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.66■□□□□ 0.42
HCFC1P51610 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.66■□□□□ 0.42
HCFC1P51610 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCFC1P51610 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.65■□□□□ 0.42
HCFC1P51610 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.65■□□□□ 0.42
HCFC1P51610 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.65■□□□□ 0.42
HCFC1P51610 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC1P51610 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC1P51610 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.65■□□□□ 0.42
HCFC1P51610 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.65■□□□□ 0.42
HCFC1P51610 KRT18P35-201ENST00000510488 1269 ntBASIC17.65■□□□□ 0.42
HCFC1P51610 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.65■□□□□ 0.42
HCFC1P51610 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC1P51610 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC1P51610 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
HCFC1P51610 NBPF21P-201ENST00000425093 1451 ntBASIC17.64■□□□□ 0.42
HCFC1P51610 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC1P51610 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HCFC1P51610 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.64■□□□□ 0.41
HCFC1P51610 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC1P51610 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.64■□□□□ 0.41
HCFC1P51610 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.64■□□□□ 0.41
HCFC1P51610 AF186192.3-201ENST00000583427 947 ntBASIC17.64■□□□□ 0.41
HCFC1P51610 AC026471.5-201ENST00000615068 467 ntBASIC17.64■□□□□ 0.41
HCFC1P51610 AC026310.3-201ENST00000625186 2373 ntBASIC17.64■□□□□ 0.41
HCFC1P51610 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC1P51610 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.64■□□□□ 0.41
HCFC1P51610 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.64■□□□□ 0.41
HCFC1P51610 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC1P51610 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC1P51610 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.64■□□□□ 0.41
HCFC1P51610 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC1P51610 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC1P51610 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.63■□□□□ 0.41
HCFC1P51610 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.63■□□□□ 0.41
HCFC1P51610 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HCFC1P51610 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HCFC1P51610 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HCFC1P51610 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
HCFC1P51610 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC1P51610 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.62■□□□□ 0.41
HCFC1P51610 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HCFC1P51610 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC1P51610 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.62■□□□□ 0.41
HCFC1P51610 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms