Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.22■□□□□ 0.99
TUBP50607 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.22■□□□□ 0.99
TUBP50607 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TUBP50607 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 MIR2861-201ENST00000636310 90 ntBASIC21.22■□□□□ 0.99
TUBP50607 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBP50607 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TUBP50607 AC007952.6-201ENST00000573168 2673 ntBASIC21.22■□□□□ 0.99
TUBP50607 AC003957.1-201ENST00000625108 2673 ntBASIC21.22■□□□□ 0.99
TUBP50607 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBP50607 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBP50607 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TUBP50607 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBP50607 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBP50607 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBP50607 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
TUBP50607 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBP50607 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.21■□□□□ 0.99
TUBP50607 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
TUBP50607 UNC93B4-201ENST00000505679 747 ntBASIC21.21■□□□□ 0.99
TUBP50607 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.21■□□□□ 0.99
TUBP50607 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
TUBP50607 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBP50607 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBP50607 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBP50607 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.2■□□□□ 0.98
TUBP50607 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBP50607 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.2■□□□□ 0.98
TUBP50607 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBP50607 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBP50607 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TUBP50607 PRORSD1P-201ENST00000295112 541 ntBASIC21.2■□□□□ 0.98
TUBP50607 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.2■□□□□ 0.98
TUBP50607 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.2■□□□□ 0.98
TUBP50607 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.2■□□□□ 0.98
TUBP50607 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.2■□□□□ 0.98
TUBP50607 AC008403.3-201ENST00000598924 454 ntBASIC21.2■□□□□ 0.98
TUBP50607 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
TUBP50607 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBP50607 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.2■□□□□ 0.98
TUBP50607 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBP50607 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
TUBP50607 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TUBP50607 KRT8P36-201ENST00000489121 1440 ntBASIC21.2■□□□□ 0.98
TUBP50607 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TUBP50607 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.19■□□□□ 0.98
TUBP50607 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TUBP50607 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TUBP50607 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.19■□□□□ 0.98
TUBP50607 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TUBP50607 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TUBP50607 AC006058.3-201ENST00000606217 1069 ntBASIC21.19■□□□□ 0.98
TUBP50607 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TUBP50607 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TUBP50607 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBP50607 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.19■□□□□ 0.98
TUBP50607 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBP50607 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
TUBP50607 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TUBP50607 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBP50607 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TUBP50607 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.18■□□□□ 0.98
TUBP50607 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBP50607 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.18■□□□□ 0.98
TUBP50607 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.18■□□□□ 0.98
TUBP50607 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms