Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MTHFRP42898 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFRP42898 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFRP42898 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MTHFRP42898 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFRP42898 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.17■□□□□ 0.98
MTHFRP42898 FAM197Y1-201ENST00000421178 764 ntBASIC21.17■□□□□ 0.98
MTHFRP42898 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFRP42898 AC145285.6-201ENST00000604632 637 ntBASIC21.17■□□□□ 0.98
MTHFRP42898 AC073195.1-201ENST00000607241 877 ntBASIC21.17■□□□□ 0.98
MTHFRP42898 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.17■□□□□ 0.98
MTHFRP42898 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.17■□□□□ 0.98
MTHFRP42898 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.17■□□□□ 0.98
MTHFRP42898 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.17■□□□□ 0.98
MTHFRP42898 NBPF21P-201ENST00000425093 1451 ntBASIC21.17■□□□□ 0.98
MTHFRP42898 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.17■□□□□ 0.98
MTHFRP42898 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.17■□□□□ 0.98
MTHFRP42898 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.17■□□□□ 0.98
MTHFRP42898 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFRP42898 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.17■□□□□ 0.98
MTHFRP42898 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.17■□□□□ 0.98
MTHFRP42898 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFRP42898 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
MTHFRP42898 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.16■□□□□ 0.98
MTHFRP42898 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MTHFRP42898 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.16■□□□□ 0.98
MTHFRP42898 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
MTHFRP42898 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
MTHFRP42898 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
MTHFRP42898 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.16■□□□□ 0.98
MTHFRP42898 AC005363.2-201ENST00000618631 242 ntBASIC21.16■□□□□ 0.98
MTHFRP42898 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MTHFRP42898 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFRP42898 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFRP42898 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFRP42898 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
MTHFRP42898 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
MTHFRP42898 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.15■□□□□ 0.98
MTHFRP42898 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFRP42898 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFRP42898 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFRP42898 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.15■□□□□ 0.98
MTHFRP42898 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.15■□□□□ 0.98
MTHFRP42898 MIR6786-201ENST00000616843 113 ntBASIC21.15■□□□□ 0.98
MTHFRP42898 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFRP42898 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFRP42898 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.15■□□□□ 0.98
MTHFRP42898 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFRP42898 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MTHFRP42898 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MTHFRP42898 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.14■□□□□ 0.97
MTHFRP42898 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MTHFRP42898 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFRP42898 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.14■□□□□ 0.97
MTHFRP42898 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFRP42898 AC023632.3-201ENST00000521633 145 ntBASIC21.14■□□□□ 0.97
MTHFRP42898 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MTHFRP42898 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.14■□□□□ 0.97
MTHFRP42898 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.14■□□□□ 0.97
MTHFRP42898 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFRP42898 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.14■□□□□ 0.97
MTHFRP42898 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.14■□□□□ 0.97
MTHFRP42898 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFRP42898 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFRP42898 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.14■□□□□ 0.97
MTHFRP42898 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFRP42898 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.13■□□□□ 0.97
MTHFRP42898 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
MTHFRP42898 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
MTHFRP42898 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.13■□□□□ 0.97
MTHFRP42898 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.13■□□□□ 0.97
MTHFRP42898 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFRP42898 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.13■□□□□ 0.97
MTHFRP42898 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MTHFRP42898 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.12■□□□□ 0.97
MTHFRP42898 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MTHFRP42898 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.12■□□□□ 0.97
MTHFRP42898 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.12■□□□□ 0.97
MTHFRP42898 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MTHFRP42898 RBM17P1-201ENST00000453646 1190 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms