Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 SPG3YDR504C 384 nt2.05□□□□□ -2.08
VPS41P38959 YIL032CYIL032C 357 nt2.05□□□□□ -2.08
VPS41P38959 PCC1YKR095W-A 267 nt2.05□□□□□ -2.08
VPS41P38959 YLR053CYLR053C 327 nt2.05□□□□□ -2.08
VPS41P38959 UPS1YLR193C 528 nt2.05□□□□□ -2.08
VPS41P38959 YBL083CYBL083C 426 nt2.05□□□□□ -2.08
VPS41P38959 YOR394C-AYOR394C-A 168 nt2.05□□□□□ -2.08
VPS41P38959 SPO22YIL073C 2928 nt2.04□□□□□ -2.08
VPS41P38959 NPC2YDL046W 522 nt2.04□□□□□ -2.08
VPS41P38959 YDR426CYDR426C 378 nt2.04□□□□□ -2.08
VPS41P38959 HOP2YGL033W 657 nt2.04□□□□□ -2.08
VPS41P38959 YPP1YGR198W 2454 nt2.04□□□□□ -2.08
VPS41P38959 YGR265WYGR265W 411 nt2.04□□□□□ -2.08
VPS41P38959 SLM1YIL105C 2061 nt2.04□□□□□ -2.08
VPS41P38959 HCS1YKL017C 2052 nt2.04□□□□□ -2.08
VPS41P38959 YKR075W-AYKR075W-A 270 nt2.04□□□□□ -2.08
VPS41P38959 RPL38YLR325C 237 nt2.04□□□□□ -2.08
VPS41P38959 YML007C-AYML007C-A 111 nt2.04□□□□□ -2.08
VPS41P38959 STB4YMR019W 2850 nt2.04□□□□□ -2.08
VPS41P38959 SWI6YLR182W 2412 nt2.03□□□□□ -2.08
VPS41P38959 YGL188C-AYGL188C-A 141 nt2.03□□□□□ -2.08
VPS41P38959 YHL042WYHL042W 453 nt2.03□□□□□ -2.08
VPS41P38959 YOR333CYOR333C 417 nt2.03□□□□□ -2.08
VPS41P38959 RTP1YMR185W 2946 nt2.03□□□□□ -2.08
VPS41P38959 CDC53YDL132W 2448 nt2.02□□□□□ -2.09
VPS41P38959 NOP53YPL146C 1368 nt2.02□□□□□ -2.09
VPS41P38959 RAD61YDR014W 1944 nt2.02□□□□□ -2.09
VPS41P38959 YLR146W-AYLR146W-A 189 nt2.02□□□□□ -2.09
VPS41P38959 NUT2YPR168W 474 nt2.02□□□□□ -2.09
VPS41P38959 CFT2YLR115W 2580 nt2.02□□□□□ -2.09
VPS41P38959 HSH155YMR288W 2916 nt2.01□□□□□ -2.09
VPS41P38959 LHS1YKL073W 2646 nt2.01□□□□□ -2.09
VPS41P38959 YDL062WYDL062W 426 nt2.01□□□□□ -2.09
VPS41P38959 VTC1YER072W 390 nt2.01□□□□□ -2.09
VPS41P38959 snR60snR60 104 nt2□□□□□ -2.09
VPS41P38959 SWI5YDR146C 2130 nt2□□□□□ -2.09
VPS41P38959 FAB1YFR019W 6837 nt1.99□□□□□ -2.09
VPS41P38959 PET309YLR067C 2898 nt1.99□□□□□ -2.09
VPS41P38959 YOR093CYOR093C 4947 nt1.99□□□□□ -2.09
VPS41P38959 YGR250CYGR250C 2346 nt1.99□□□□□ -2.09
VPS41P38959 YDR286CYDR286C 345 nt1.99□□□□□ -2.09
VPS41P38959 ALG13YGL047W 609 nt1.99□□□□□ -2.09
VPS41P38959 YKL183C-AYKL183C-A 213 nt1.99□□□□□ -2.09
VPS41P38959 YMR141W-AYMR141W-A 225 nt1.99□□□□□ -2.09
VPS41P38959 YMR247W-AYMR247W-A 144 nt1.99□□□□□ -2.09
VPS41P38959 YNL114CYNL114C 372 nt1.99□□□□□ -2.09
VPS41P38959 YOR008C-AYOR008C-A 225 nt1.99□□□□□ -2.09
VPS41P38959 snR49snR49 165 nt1.99□□□□□ -2.09
VPS41P38959 SSQ1YLR369W 1974 nt1.98□□□□□ -2.09
VPS41P38959 PXA2YKL188C 2562 nt1.98□□□□□ -2.09
VPS41P38959 snR80snR80 171 nt1.98□□□□□ -2.09
VPS41P38959 JLP2YMR132C 627 nt1.98□□□□□ -2.09
VPS41P38959 RPB10YOR210W 213 nt1.98□□□□□ -2.09
VPS41P38959 MNE1YOR350C 1992 nt1.98□□□□□ -2.09
VPS41P38959 IRA1YBR140C 9279 nt1.97□□□□□ -2.09
VPS41P38959 YPR002C-AYPR002C-A 198 nt1.97□□□□□ -2.09
VPS41P38959 YPR063CYPR063C 423 nt1.97□□□□□ -2.09
VPS41P38959 ZRG8YER033C 3231 nt1.97□□□□□ -2.09
VPS41P38959 YHR214C-BYHR214C-B 5382 nt1.97□□□□□ -2.09
VPS41P38959 COG8YML071C 1824 nt1.96□□□□□ -2.1
VPS41P38959 CHC1YGL206C 4962 nt1.96□□□□□ -2.1
VPS41P38959 YCR043CYCR043C 384 nt1.96□□□□□ -2.1
VPS41P38959 tM(CAU)Q1tM(CAU)Q1 76 nt1.96□□□□□ -2.1
VPS41P38959 YHR073W-AYHR073W-A 177 nt1.96□□□□□ -2.1
VPS41P38959 RPH1YER169W 2391 nt1.96□□□□□ -2.1
VPS41P38959 MUK1YPL070W 1839 nt1.96□□□□□ -2.1
VPS41P38959 UTP21YLR409C 2820 nt1.95□□□□□ -2.1
VPS41P38959 SLY1YDR189W 2001 nt1.95□□□□□ -2.1
VPS41P38959 MYO2YOR326W 4725 nt1.95□□□□□ -2.1
VPS41P38959 NUP120YKL057C 3114 nt1.95□□□□□ -2.1
VPS41P38959 YCR102W-AYCR102W-A 198 nt1.95□□□□□ -2.1
VPS41P38959 YER172C-AYER172C-A 381 nt1.95□□□□□ -2.1
VPS41P38959 tT(UGU)HtT(UGU)H 72 nt1.95□□□□□ -2.1
VPS41P38959 YJL135WYJL135W 318 nt1.95□□□□□ -2.1
VPS41P38959 ATP7YKL016C 525 nt1.95□□□□□ -2.1
VPS41P38959 SDH2YLL041C 801 nt1.95□□□□□ -2.1
VPS41P38959 NAM7YMR080C 2916 nt1.95□□□□□ -2.1
VPS41P38959 YOR343W-BYOR343W-B 5313 nt1.94□□□□□ -2.1
VPS41P38959 RPL37BYDR500C 267 nt1.94□□□□□ -2.1
VPS41P38959 YEL020C-BYEL020C-B 198 nt1.94□□□□□ -2.1
VPS41P38959 BRP1YGL007W 378 nt1.94□□□□□ -2.1
VPS41P38959 TRX1YLR043C 312 nt1.94□□□□□ -2.1
VPS41P38959 MYO4YAL029C 4416 nt1.94□□□□□ -2.1
VPS41P38959 YDR341CYDR341C 1824 nt1.94□□□□□ -2.1
VPS41P38959 INP2YMR163C 2118 nt1.93□□□□□ -2.1
VPS41P38959 MVP1YMR004W 1536 nt1.93□□□□□ -2.1
VPS41P38959 PAU3YCR104W 375 nt1.93□□□□□ -2.1
VPS41P38959 YGL041CYGL041C 204 nt1.93□□□□□ -2.1
VPS41P38959 EMP24YGL200C 612 nt1.93□□□□□ -2.1
VPS41P38959 YLR255CYLR255C 354 nt1.93□□□□□ -2.1
VPS41P38959 SYH1YPL105C 2550 nt1.93□□□□□ -2.1
VPS41P38959 TFC8YPL007C 1767 nt1.93□□□□□ -2.1
VPS41P38959 CDC36YDL165W 576 nt1.92□□□□□ -2.1
VPS41P38959 ABF2YMR072W 552 nt1.92□□□□□ -2.1
VPS41P38959 YOL155W-AYOL155W-A 135 nt1.92□□□□□ -2.1
VPS41P38959 YCL046WYCL046W 324 nt1.92□□□□□ -2.1
VPS41P38959 RFX1YLR176C 2436 nt1.92□□□□□ -2.1
VPS41P38959 DCP2YNL118C 2913 nt1.92□□□□□ -2.1
VPS41P38959 ARP7YPR034W 1434 nt1.91□□□□□ -2.1
VPS41P38959 YNL144CYNL144C 2223 nt1.91□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms