Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
THBS4P35443 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
THBS4P35443 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.72■□□□□ 0.43
THBS4P35443 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.72■□□□□ 0.43
THBS4P35443 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.72■□□□□ 0.43
THBS4P35443 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.72■□□□□ 0.43
THBS4P35443 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.72■□□□□ 0.43
THBS4P35443 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.72■□□□□ 0.43
THBS4P35443 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
THBS4P35443 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.71■□□□□ 0.43
THBS4P35443 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
THBS4P35443 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.71■□□□□ 0.43
THBS4P35443 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
THBS4P35443 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.71■□□□□ 0.43
THBS4P35443 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
THBS4P35443 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.71■□□□□ 0.43
THBS4P35443 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.71■□□□□ 0.43
THBS4P35443 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.71■□□□□ 0.43
THBS4P35443 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
THBS4P35443 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS4P35443 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
THBS4P35443 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
THBS4P35443 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.7■□□□□ 0.42
THBS4P35443 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
THBS4P35443 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.7■□□□□ 0.42
THBS4P35443 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.7■□□□□ 0.42
THBS4P35443 AC073210.2-201ENST00000430369 194 ntBASIC17.7■□□□□ 0.42
THBS4P35443 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.7■□□□□ 0.42
THBS4P35443 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.7■□□□□ 0.42
THBS4P35443 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.7■□□□□ 0.42
THBS4P35443 AC092118.2-201ENST00000613495 667 ntBASIC17.7■□□□□ 0.42
THBS4P35443 AC100791.3-201ENST00000617619 330 ntBASIC17.7■□□□□ 0.42
THBS4P35443 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
THBS4P35443 AC092720.2-201ENST00000602388 1665 ntBASIC17.7■□□□□ 0.42
THBS4P35443 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
THBS4P35443 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
THBS4P35443 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS4P35443 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 AL162377.1-201ENST00000618844 1793 ntBASIC17.69■□□□□ 0.42
THBS4P35443 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
THBS4P35443 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 LSM12P1-201ENST00000411836 588 ntBASIC17.69■□□□□ 0.42
THBS4P35443 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.69■□□□□ 0.42
THBS4P35443 CYP2T3P-201ENST00000601990 817 ntBASIC17.69■□□□□ 0.42
THBS4P35443 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
THBS4P35443 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THBS4P35443 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
THBS4P35443 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
THBS4P35443 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THBS4P35443 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.69■□□□□ 0.42
THBS4P35443 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THBS4P35443 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS4P35443 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THBS4P35443 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.69■□□□□ 0.42
THBS4P35443 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.69■□□□□ 0.42
THBS4P35443 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS4P35443 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THBS4P35443 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.68■□□□□ 0.42
THBS4P35443 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.68■□□□□ 0.42
THBS4P35443 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS4P35443 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms