Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNNA1P35221 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.25■□□□□ 0.99
CTNNA1P35221 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.25■□□□□ 0.99
CTNNA1P35221 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CTNNA1P35221 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNNA1P35221 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNNA1P35221 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNNA1P35221 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.25■□□□□ 0.99
CTNNA1P35221 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CTNNA1P35221 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNNA1P35221 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.25■□□□□ 0.99
CTNNA1P35221 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNNA1P35221 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.24■□□□□ 0.99
CTNNA1P35221 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.24■□□□□ 0.99
CTNNA1P35221 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CTNNA1P35221 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.24■□□□□ 0.99
CTNNA1P35221 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.24■□□□□ 0.99
CTNNA1P35221 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.24■□□□□ 0.99
CTNNA1P35221 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.24■□□□□ 0.99
CTNNA1P35221 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CTNNA1P35221 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CTNNA1P35221 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTNNA1P35221 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CTNNA1P35221 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.23■□□□□ 0.99
CTNNA1P35221 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.23■□□□□ 0.99
CTNNA1P35221 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.23■□□□□ 0.99
CTNNA1P35221 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.23■□□□□ 0.99
CTNNA1P35221 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 KRT19P1-201ENST00000405746 1186 ntBASIC21.23■□□□□ 0.99
CTNNA1P35221 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.23■□□□□ 0.99
CTNNA1P35221 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.23■□□□□ 0.99
CTNNA1P35221 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.23■□□□□ 0.99
CTNNA1P35221 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CTNNA1P35221 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.23■□□□□ 0.99
CTNNA1P35221 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTNNA1P35221 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTNNA1P35221 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.22■□□□□ 0.99
CTNNA1P35221 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTNNA1P35221 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTNNA1P35221 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.22■□□□□ 0.99
CTNNA1P35221 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTNNA1P35221 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTNNA1P35221 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.22■□□□□ 0.99
CTNNA1P35221 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.22■□□□□ 0.99
CTNNA1P35221 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CTNNA1P35221 UBE2DNL-204ENST00000602536 740 ntBASIC21.22■□□□□ 0.99
CTNNA1P35221 FAM21FP-204ENST00000608637 956 ntBASIC21.22■□□□□ 0.99
CTNNA1P35221 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTNNA1P35221 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTNNA1P35221 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.22■□□□□ 0.99
CTNNA1P35221 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.21■□□□□ 0.99
CTNNA1P35221 DPP3P2-201ENST00000416030 1696 ntBASIC21.21■□□□□ 0.99
CTNNA1P35221 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTNNA1P35221 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.21■□□□□ 0.99
CTNNA1P35221 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.21■□□□□ 0.99
CTNNA1P35221 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTNNA1P35221 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.21■□□□□ 0.99
CTNNA1P35221 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTNNA1P35221 ZNRF2P3-201ENST00000424200 374 ntBASIC21.21■□□□□ 0.99
CTNNA1P35221 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTNNA1P35221 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.21■□□□□ 0.99
CTNNA1P35221 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.21■□□□□ 0.99
CTNNA1P35221 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.21■□□□□ 0.99
CTNNA1P35221 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CTNNA1P35221 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTNNA1P35221 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTNNA1P35221 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.21■□□□□ 0.99
CTNNA1P35221 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms