Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC6A4P31645 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC6A4P31645 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC6A4P31645 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A4P31645 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A4P31645 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SLC6A4P31645 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC6A4P31645 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC6A4P31645 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC6A4P31645 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A4P31645 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A4P31645 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC6A4P31645 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A4P31645 AC092720.2-201ENST00000602388 1665 ntBASIC20.74■□□□□ 0.91
SLC6A4P31645 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC6A4P31645 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC6A4P31645 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A4P31645 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A4P31645 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A4P31645 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC6A4P31645 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLC6A4P31645 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SLC6A4P31645 AL390719.1-204ENST00000412397 1219 ntBASIC20.74■□□□□ 0.91
SLC6A4P31645 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLC6A4P31645 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC6A4P31645 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC6A4P31645 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SLC6A4P31645 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC6A4P31645 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC6A4P31645 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.74■□□□□ 0.91
SLC6A4P31645 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC6A4P31645 DPP3P2-201ENST00000416030 1696 ntBASIC20.73■□□□□ 0.91
SLC6A4P31645 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SLC6A4P31645 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SLC6A4P31645 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 POM121L13P-201ENST00000422362 380 ntBASIC20.73■□□□□ 0.91
SLC6A4P31645 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.73■□□□□ 0.91
SLC6A4P31645 AC120498.8-201ENST00000614275 531 ntBASIC20.73■□□□□ 0.91
SLC6A4P31645 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC6A4P31645 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SLC6A4P31645 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
SLC6A4P31645 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC6A4P31645 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC6A4P31645 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC6A4P31645 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SLC6A4P31645 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SLC6A4P31645 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC6A4P31645 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SLC6A4P31645 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A4P31645 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A4P31645 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A4P31645 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SLC6A4P31645 KRT17P3-201ENST00000420566 1262 ntBASIC20.72■□□□□ 0.91
SLC6A4P31645 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SLC6A4P31645 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A4P31645 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.72■□□□□ 0.91
SLC6A4P31645 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC6A4P31645 AC069544.1-201ENST00000609399 999 ntBASIC20.72■□□□□ 0.91
SLC6A4P31645 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A4P31645 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC6A4P31645 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A4P31645 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC6A4P31645 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A4P31645 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A4P31645 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A4P31645 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A4P31645 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SLC6A4P31645 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC6A4P31645 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SLC6A4P31645 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A4P31645 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SLC6A4P31645 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A4P31645 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC6A4P31645 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC6A4P31645 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.71■□□□□ 0.91
SLC6A4P31645 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A4P31645 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SLC6A4P31645 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC6A4P31645 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC6A4P31645 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC6A4P31645 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
SLC6A4P31645 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A4P31645 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SLC6A4P31645 RPS2P52-201ENST00000469610 820 ntBASIC20.7■□□□□ 0.9
SLC6A4P31645 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A4P31645 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC6A4P31645 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC6A4P31645 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC6A4P31645 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A4P31645 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A4P31645 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SLC6A4P31645 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A4P31645 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms