Protein–RNA interactions for Protein: P25648

SRB8, Mediator of RNA polymerase II transcription subunit 12, yeastyeast

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRB8P25648 LSM4YER112W 564 nt0□□□□□ -2.41
SRB8P25648 YHL002C-AYHL002C-A 489 nt0□□□□□ -2.41
SRB8P25648 SPR2YOR214C 711 nt0□□□□□ -2.41
SRB8P25648 BI3Q0115 1554 nt-0.01□□□□□ -2.41
SRB8P25648 POP6YGR030C 477 nt-0.01□□□□□ -2.41
SRB8P25648 LSO2YGR169C-A 279 nt-0.02□□□□□ -2.41
SRB8P25648 SCW11YGL028C 1629 nt-0.02□□□□□ -2.41
SRB8P25648 YOP1YPR028W 543 nt-0.03□□□□□ -2.41
SRB8P25648 YPR153WYPR153W 423 nt-0.03□□□□□ -2.41
SRB8P25648 REF2YDR195W 1602 nt-0.03□□□□□ -2.41
SRB8P25648 KAR3YPR141C 2190 nt-0.03□□□□□ -2.41
SRB8P25648 RPL26BYGR034W 384 nt-0.04□□□□□ -2.42
SRB8P25648 SWI5YDR146C 2130 nt-0.04□□□□□ -2.42
SRB8P25648 YGR164WYGR164W 336 nt-0.04□□□□□ -2.42
SRB8P25648 YLR232WYLR232W 348 nt-0.04□□□□□ -2.42
SRB8P25648 YNL171CYNL171C 369 nt-0.04□□□□□ -2.42
SRB8P25648 YOR053WYOR053W 342 nt-0.04□□□□□ -2.42
SRB8P25648 YOR108C-AYOR108C-A 210 nt-0.04□□□□□ -2.42
SRB8P25648 LOA1YPR139C 903 nt-0.04□□□□□ -2.42
SRB8P25648 YPR172WYPR172W 603 nt-0.04□□□□□ -2.42
SRB8P25648 COX12YLR038C 252 nt-0.05□□□□□ -2.42
SRB8P25648 RPS16AYMR143W 432 nt-0.05□□□□□ -2.42
SRB8P25648 NPR2YEL062W 1848 nt-0.06□□□□□ -2.42
SRB8P25648 NUP82YJL061W 2142 nt-0.06□□□□□ -2.42
SRB8P25648 KAR1YNL188W 1302 nt-0.06□□□□□ -2.42
SRB8P25648 RAD34YDR314C 2079 nt-0.06□□□□□ -2.42
SRB8P25648 MMS4YBR098W 2076 nt-0.06□□□□□ -2.42
SRB8P25648 ZIP1YDR285W 2628 nt-0.06□□□□□ -2.42
SRB8P25648 YHR028W-AYHR028W-A 321 nt-0.06□□□□□ -2.42
SRB8P25648 YOL118CYOL118C 309 nt-0.06□□□□□ -2.42
SRB8P25648 RPL29YFR032C-A 180 nt-0.07□□□□□ -2.42
SRB8P25648 YGR042WYGR042W 816 nt-0.07□□□□□ -2.42
SRB8P25648 TIM8YJR135W-A 264 nt-0.07□□□□□ -2.42
SRB8P25648 YOR282WYOR282W 321 nt-0.07□□□□□ -2.42
SRB8P25648 YPL060C-AYPL060C-A 3315 nt-0.07□□□□□ -2.42
SRB8P25648 AI5_ALPHAQ0070 1893 nt-0.08□□□□□ -2.42
SRB8P25648 YEL010WYEL010W 351 nt-0.08□□□□□ -2.42
SRB8P25648 YGL258W-AYGL258W-A 234 nt-0.08□□□□□ -2.42
SRB8P25648 PMP1YCR024C-A 123 nt-0.09□□□□□ -2.42
SRB8P25648 YCR024C-BYCR024C-B 267 nt-0.09□□□□□ -2.42
SRB8P25648 YGL042CYGL042C 306 nt-0.09□□□□□ -2.42
SRB8P25648 YHR139C-AYHR139C-A 312 nt-0.09□□□□□ -2.42
SRB8P25648 YPL080CYPL080C 327 nt-0.09□□□□□ -2.42
SRB8P25648 NOP9YJL010C 2001 nt-0.1□□□□□ -2.42
SRB8P25648 YDL068WYDL068W 330 nt-0.1□□□□□ -2.43
SRB8P25648 MET32YDR253C 576 nt-0.1□□□□□ -2.43
SRB8P25648 LCD1YDR499W 2244 nt-0.1□□□□□ -2.43
SRB8P25648 VIK1YPL253C 1944 nt-0.11□□□□□ -2.43
SRB8P25648 RPS7BYNL096C 573 nt-0.11□□□□□ -2.43
SRB8P25648 RCN2YOR220W 798 nt-0.11□□□□□ -2.43
SRB8P25648 MMS21YEL019C 804 nt-0.12□□□□□ -2.43
SRB8P25648 BLS1YLR408C 369 nt-0.12□□□□□ -2.43
SRB8P25648 PRP5YBR237W 2550 nt-0.12□□□□□ -2.43
SRB8P25648 MLP1YKR095W 5628 nt-0.12□□□□□ -2.43
SRB8P25648 snR190snR190 190 nt-0.13□□□□□ -2.43
SRB8P25648 snR46snR46 197 nt-0.13□□□□□ -2.43
SRB8P25648 URB1YKL014C 5295 nt-0.13□□□□□ -2.43
SRB8P25648 PET111YMR257C 2403 nt-0.13□□□□□ -2.43
SRB8P25648 YJL086CYJL086C 369 nt-0.13□□□□□ -2.43
SRB8P25648 RSM18YER050C 417 nt-0.14□□□□□ -2.43
SRB8P25648 HOT13YKL084W 351 nt-0.14□□□□□ -2.43
SRB8P25648 HNT1YDL125C 477 nt-0.15□□□□□ -2.43
SRB8P25648 THG1YGR024C 714 nt-0.15□□□□□ -2.43
SRB8P25648 BIG1YHR101C 1008 nt-0.15□□□□□ -2.43
SRB8P25648 YDR182W-AYDR182W-A 204 nt-0.16□□□□□ -2.44
SRB8P25648 NTF2YER009W 378 nt-0.16□□□□□ -2.44
SRB8P25648 EMC4YGL231C 573 nt-0.16□□□□□ -2.44
SRB8P25648 YJL127W-AYJL127W-A 117 nt-0.16□□□□□ -2.44
SRB8P25648 ARV1YLR242C 966 nt-0.16□□□□□ -2.44
SRB8P25648 YLR252WYLR252W 306 nt-0.16□□□□□ -2.44
SRB8P25648 RPL26AYLR344W 384 nt-0.16□□□□□ -2.44
SRB8P25648 RRT1YBL048W 312 nt-0.16□□□□□ -2.44
SRB8P25648 IPI3YNL182C 1668 nt-0.16□□□□□ -2.44
SRB8P25648 snR84snR84 550 nt-0.17□□□□□ -2.44
SRB8P25648 YDR114CYDR114C 303 nt-0.17□□□□□ -2.44
SRB8P25648 VMA21YGR105W 234 nt-0.17□□□□□ -2.44
SRB8P25648 UPS1YLR193C 528 nt-0.17□□□□□ -2.44
SRB8P25648 YDL152WYDL152W 366 nt-0.18□□□□□ -2.44
SRB8P25648 RPL35AYDL191W 363 nt-0.18□□□□□ -2.44
SRB8P25648 GSP1YLR293C 660 nt-0.18□□□□□ -2.44
SRB8P25648 SPO23YBR250W 1572 nt-0.2□□□□□ -2.44
SRB8P25648 SPO11YHL022C 1197 nt-0.2□□□□□ -2.44
SRB8P25648 FYV10YIL097W 1551 nt-0.2□□□□□ -2.44
SRB8P25648 YHL042WYHL042W 453 nt-0.21□□□□□ -2.44
SRB8P25648 ATP20YPR020W 348 nt-0.21□□□□□ -2.44
SRB8P25648 SSS1YDR086C 243 nt-0.21□□□□□ -2.44
SRB8P25648 CMS1YLR003C 876 nt-0.21□□□□□ -2.44
SRB8P25648 INP2YMR163C 2118 nt-0.21□□□□□ -2.44
SRB8P25648 RPC10YHR143W-A 213 nt-0.22□□□□□ -2.45
SRB8P25648 PRP42YDR235W 1635 nt-0.23□□□□□ -2.45
SRB8P25648 VPS63YLR261C 327 nt-0.23□□□□□ -2.45
SRB8P25648 RPB10YOR210W 213 nt-0.23□□□□□ -2.45
SRB8P25648 RPS27AYKL156W 249 nt-0.24□□□□□ -2.45
SRB8P25648 BSC3YLR465C 309 nt-0.24□□□□□ -2.45
SRB8P25648 RCO1YMR075W 2055 nt-0.24□□□□□ -2.45
SRB8P25648 YDR344CYDR344C 444 nt-0.25□□□□□ -2.45
SRB8P25648 YMR158C-AYMR158C-A 138 nt-0.25□□□□□ -2.45
SRB8P25648 YNR077CYNR077C 255 nt-0.25□□□□□ -2.45
SRB8P25648 snR79snR79 84 nt-0.27□□□□□ -2.45
SRB8P25648 YER038W-AYER038W-A 381 nt-0.27□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms