Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.05■□□□□ 0.32
COL8A2P25067 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.05■□□□□ 0.32
COL8A2P25067 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
COL8A2P25067 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.05■□□□□ 0.32
COL8A2P25067 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.05■□□□□ 0.32
COL8A2P25067 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.05■□□□□ 0.32
COL8A2P25067 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.05■□□□□ 0.32
COL8A2P25067 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
COL8A2P25067 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.05■□□□□ 0.32
COL8A2P25067 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.05■□□□□ 0.32
COL8A2P25067 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COL8A2P25067 AC005829.2-201ENST00000571422 1056 ntBASIC17.05■□□□□ 0.32
COL8A2P25067 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.05■□□□□ 0.32
COL8A2P25067 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL8A2P25067 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.04■□□□□ 0.32
COL8A2P25067 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.04■□□□□ 0.32
COL8A2P25067 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.04■□□□□ 0.32
COL8A2P25067 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.04■□□□□ 0.32
COL8A2P25067 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.04■□□□□ 0.32
COL8A2P25067 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
COL8A2P25067 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.04■□□□□ 0.32
COL8A2P25067 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.04■□□□□ 0.32
COL8A2P25067 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.04■□□□□ 0.32
COL8A2P25067 AC233263.1-201ENST00000578059 224 ntBASIC17.04■□□□□ 0.32
COL8A2P25067 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL8A2P25067 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL8A2P25067 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL8A2P25067 PKD1P6-201ENST00000343738 4769 ntBASIC17.03■□□□□ 0.32
COL8A2P25067 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL8A2P25067 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.03■□□□□ 0.32
COL8A2P25067 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.03■□□□□ 0.32
COL8A2P25067 AL390719.1-204ENST00000412397 1219 ntBASIC17.03■□□□□ 0.32
COL8A2P25067 POM121L13P-201ENST00000422362 380 ntBASIC17.03■□□□□ 0.32
COL8A2P25067 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
COL8A2P25067 AC093827.2-201ENST00000512654 315 ntBASIC17.03■□□□□ 0.32
COL8A2P25067 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.03■□□□□ 0.32
COL8A2P25067 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL8A2P25067 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.03■□□□□ 0.32
COL8A2P25067 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.03■□□□□ 0.32
COL8A2P25067 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COL8A2P25067 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.03■□□□□ 0.32
COL8A2P25067 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL8A2P25067 AL157384.1-201ENST00000445995 2473 ntBASIC17.03■□□□□ 0.32
COL8A2P25067 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.02■□□□□ 0.32
COL8A2P25067 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.02■□□□□ 0.32
COL8A2P25067 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.02■□□□□ 0.32
COL8A2P25067 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COL8A2P25067 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COL8A2P25067 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 C1QBPP2-201ENST00000528754 825 ntBASIC17.02■□□□□ 0.32
COL8A2P25067 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 RN7SL471P-201ENST00000580476 299 ntBASIC17.02■□□□□ 0.32
COL8A2P25067 AC120498.8-201ENST00000614275 531 ntBASIC17.02■□□□□ 0.32
COL8A2P25067 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
COL8A2P25067 AL359736.2-201ENST00000621992 437 ntBASIC17.02■□□□□ 0.32
COL8A2P25067 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL8A2P25067 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL8A2P25067 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms