Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
APCP25054 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
APCP25054 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
APCP25054 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.15■□□□□ 0.34
APCP25054 AC011558.1-201ENST00000623459 338 ntBASIC17.15■□□□□ 0.34
APCP25054 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
APCP25054 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
APCP25054 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.14■□□□□ 0.33
APCP25054 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
APCP25054 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
APCP25054 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.14■□□□□ 0.33
APCP25054 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.14■□□□□ 0.33
APCP25054 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
APCP25054 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.14■□□□□ 0.33
APCP25054 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
APCP25054 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.14■□□□□ 0.33
APCP25054 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.14■□□□□ 0.33
APCP25054 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 AC246785.2-201ENST00000432512 513 ntBASIC17.14■□□□□ 0.33
APCP25054 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.14■□□□□ 0.33
APCP25054 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.14■□□□□ 0.33
APCP25054 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.14■□□□□ 0.33
APCP25054 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APCP25054 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.14■□□□□ 0.33
APCP25054 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.13■□□□□ 0.33
APCP25054 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.13■□□□□ 0.33
APCP25054 PVRIG2P-201ENST00000435460 978 ntBASIC17.13■□□□□ 0.33
APCP25054 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.13■□□□□ 0.33
APCP25054 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.13■□□□□ 0.33
APCP25054 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 AC092647.4-201ENST00000457211 535 ntBASIC17.13■□□□□ 0.33
APCP25054 B3GAT3P1-201ENST00000471720 806 ntBASIC17.13■□□□□ 0.33
APCP25054 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
APCP25054 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APCP25054 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APCP25054 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.12■□□□□ 0.33
APCP25054 AC130371.2-201ENST00000619443 611 ntBASIC17.12■□□□□ 0.33
APCP25054 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APCP25054 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APCP25054 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.12■□□□□ 0.33
APCP25054 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.12■□□□□ 0.33
APCP25054 AC005332.1-201ENST00000577698 1310 ntBASIC17.12■□□□□ 0.33
APCP25054 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APCP25054 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.12■□□□□ 0.33
APCP25054 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
APCP25054 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APCP25054 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.12■□□□□ 0.33
APCP25054 DGCR10-201ENST00000609839 495 ntBASIC17.12■□□□□ 0.33
APCP25054 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APCP25054 HMGA1P5-201ENST00000412453 271 ntBASIC17.11■□□□□ 0.33
APCP25054 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
APCP25054 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
APCP25054 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APCP25054 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.11■□□□□ 0.33
APCP25054 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.11■□□□□ 0.33
APCP25054 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APCP25054 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.11■□□□□ 0.33
APCP25054 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APCP25054 PCED1CP-201ENST00000419887 785 ntBASIC17.11■□□□□ 0.33
APCP25054 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.11■□□□□ 0.33
APCP25054 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.11■□□□□ 0.33
APCP25054 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.11■□□□□ 0.33
APCP25054 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.11■□□□□ 0.33
APCP25054 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.11■□□□□ 0.33
APCP25054 AC069148.1-201ENST00000608741 768 ntBASIC17.11■□□□□ 0.33
APCP25054 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.11■□□□□ 0.33
APCP25054 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.11■□□□□ 0.33
APCP25054 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.11■□□□□ 0.33
APCP25054 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APCP25054 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.11■□□□□ 0.33
APCP25054 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APCP25054 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms