Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 TRX1YLR043C 312 nt1.8□□□□□ -2.12
VMA16P23968 RPL38YLR325C 237 nt1.8□□□□□ -2.12
VMA16P23968 DGR1YNL130C-A 147 nt1.8□□□□□ -2.12
VMA16P23968 RLM1YPL089C 2031 nt1.79□□□□□ -2.12
VMA16P23968 UBR2YLR024C 5619 nt1.79□□□□□ -2.12
VMA16P23968 YHR210CYHR210C 1026 nt1.79□□□□□ -2.12
VMA16P23968 YKL118WYKL118W 312 nt1.79□□□□□ -2.12
VMA16P23968 TMA7YLR262C-A 195 nt1.79□□□□□ -2.12
VMA16P23968 SEY1YOR165W 2331 nt1.79□□□□□ -2.12
VMA16P23968 MSH6YDR097C 3729 nt1.79□□□□□ -2.12
VMA16P23968 RPL35AYDL191W 363 nt1.78□□□□□ -2.12
VMA16P23968 VTC1YER072W 390 nt1.78□□□□□ -2.12
VMA16P23968 YJR039WYJR039W 3366 nt1.78□□□□□ -2.12
VMA16P23968 HSH155YMR288W 2916 nt1.78□□□□□ -2.12
VMA16P23968 MAK10YEL053C 2202 nt1.78□□□□□ -2.13
VMA16P23968 YMR045CYMR045C 5268 nt1.77□□□□□ -2.13
VMA16P23968 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
VMA16P23968 YPP1YGR198W 2454 nt1.77□□□□□ -2.13
VMA16P23968 ENV11YGR071C 2583 nt1.76□□□□□ -2.13
VMA16P23968 MDM20YOL076W 2391 nt1.76□□□□□ -2.13
VMA16P23968 MUK1YPL070W 1839 nt1.76□□□□□ -2.13
VMA16P23968 YKL136WYKL136W 399 nt1.76□□□□□ -2.13
VMA16P23968 snR51snR51 107 nt1.76□□□□□ -2.13
VMA16P23968 SAP190YKR028W 3102 nt1.76□□□□□ -2.13
VMA16P23968 HSL1YKL101W 4557 nt1.76□□□□□ -2.13
VMA16P23968 YLL032CYLL032C 2478 nt1.75□□□□□ -2.13
VMA16P23968 YHL037CYHL037C 402 nt1.75□□□□□ -2.13
VMA16P23968 YJL052C-AYJL052C-A 120 nt1.75□□□□□ -2.13
VMA16P23968 YML007C-AYML007C-A 111 nt1.75□□□□□ -2.13
VMA16P23968 YMR247W-AYMR247W-A 144 nt1.75□□□□□ -2.13
VMA16P23968 TOR2YKL203C 7425 nt1.75□□□□□ -2.13
VMA16P23968 RIM20YOR275C 1986 nt1.75□□□□□ -2.13
VMA16P23968 IRE1YHR079C 3348 nt1.75□□□□□ -2.13
VMA16P23968 SEC31YDL195W 3822 nt1.74□□□□□ -2.13
VMA16P23968 NHP2YDL208W 471 nt1.74□□□□□ -2.13
VMA16P23968 TMA10YLR327C 261 nt1.74□□□□□ -2.13
VMA16P23968 FAB1YFR019W 6837 nt1.74□□□□□ -2.13
VMA16P23968 ZIP1YDR285W 2628 nt1.74□□□□□ -2.13
VMA16P23968 LHS1YKL073W 2646 nt1.74□□□□□ -2.13
VMA16P23968 MYO4YAL029C 4416 nt1.73□□□□□ -2.13
VMA16P23968 BRE1YDL074C 2103 nt1.73□□□□□ -2.13
VMA16P23968 SLY1YDR189W 2001 nt1.73□□□□□ -2.13
VMA16P23968 SRP14YDL092W 441 nt1.73□□□□□ -2.13
VMA16P23968 YDR183C-AYDR183C-A 258 nt1.73□□□□□ -2.13
VMA16P23968 YJR011CYJR011C 786 nt1.73□□□□□ -2.13
VMA16P23968 TAR1YLR154W-C 375 nt1.73□□□□□ -2.13
VMA16P23968 HTB2YBL002W 396 nt1.73□□□□□ -2.13
VMA16P23968 UTP21YLR409C 2820 nt1.72□□□□□ -2.13
VMA16P23968 KCS1YDR017C 3153 nt1.72□□□□□ -2.13
VMA16P23968 MLH3YPL164C 2148 nt1.72□□□□□ -2.13
VMA16P23968 YLR419WYLR419W 4308 nt1.72□□□□□ -2.13
VMA16P23968 TFC3YAL001C 3483 nt1.72□□□□□ -2.13
VMA16P23968 YER097WYER097W 330 nt1.72□□□□□ -2.13
VMA16P23968 YNL146WYNL146W 303 nt1.72□□□□□ -2.13
VMA16P23968 DCP2YNL118C 2913 nt1.72□□□□□ -2.13
VMA16P23968 YDR169C-AYDR169C-A 150 nt1.71□□□□□ -2.14
VMA16P23968 YDR413CYDR413C 576 nt1.71□□□□□ -2.14
VMA16P23968 GCN4YEL009C 846 nt1.71□□□□□ -2.14
VMA16P23968 YLR255CYLR255C 354 nt1.71□□□□□ -2.14
VMA16P23968 INP2YMR163C 2118 nt1.71□□□□□ -2.14
VMA16P23968 HMI1YOL095C 2121 nt1.71□□□□□ -2.14
VMA16P23968 YPR002C-AYPR002C-A 198 nt1.71□□□□□ -2.14
VMA16P23968 YSY6YBR162W-A 198 nt1.71□□□□□ -2.14
VMA16P23968 YNL144CYNL144C 2223 nt1.71□□□□□ -2.14
VMA16P23968 YLR035C-AYLR035C-A 3468 nt1.7□□□□□ -2.14
VMA16P23968 YHR214C-BYHR214C-B 5382 nt1.7□□□□□ -2.14
VMA16P23968 NPC2YDL046W 522 nt1.69□□□□□ -2.14
VMA16P23968 YDR182W-AYDR182W-A 204 nt1.69□□□□□ -2.14
VMA16P23968 YDR426CYDR426C 378 nt1.69□□□□□ -2.14
VMA16P23968 YFL032WYFL032W 321 nt1.69□□□□□ -2.14
VMA16P23968 PCC1YKR095W-A 267 nt1.69□□□□□ -2.14
VMA16P23968 YOR199WYOR199W 330 nt1.69□□□□□ -2.14
VMA16P23968 snR36snR36 182 nt1.69□□□□□ -2.14
VMA16P23968 SAC3YDR159W 3906 nt1.69□□□□□ -2.14
VMA16P23968 SKI3YPR189W 4299 nt1.69□□□□□ -2.14
VMA16P23968 PEP1YBL017C 4740 nt1.68□□□□□ -2.14
VMA16P23968 MYO2YOR326W 4725 nt1.68□□□□□ -2.14
VMA16P23968 APL2YKL135C 2181 nt1.68□□□□□ -2.14
VMA16P23968 PIG1YLR273C 1947 nt1.68□□□□□ -2.14
VMA16P23968 snR72snR72 98 nt1.68□□□□□ -2.14
VMA16P23968 RPL31AYDL075W 342 nt1.68□□□□□ -2.14
VMA16P23968 RPB10YOR210W 213 nt1.68□□□□□ -2.14
VMA16P23968 DGR2YKL121W 2559 nt1.68□□□□□ -2.14
VMA16P23968 FRK1YPL141C 2598 nt1.68□□□□□ -2.14
VMA16P23968 APL5YPL195W 2799 nt1.68□□□□□ -2.14
VMA16P23968 NIP100YPL174C 2607 nt1.68□□□□□ -2.14
VMA16P23968 SFB2YNL049C 2631 nt1.67□□□□□ -2.14
VMA16P23968 MON2YNL297C 4911 nt1.67□□□□□ -2.14
VMA16P23968 UTP22YGR090W 3714 nt1.67□□□□□ -2.14
VMA16P23968 YFL063WYFL063W 456 nt1.66□□□□□ -2.14
VMA16P23968 YJL135WYJL135W 318 nt1.66□□□□□ -2.14
VMA16P23968 YOL160WYOL160W 342 nt1.66□□□□□ -2.14
VMA16P23968 PKH3YDR466W 2697 nt1.65□□□□□ -2.14
VMA16P23968 PAU2YEL049W 363 nt1.65□□□□□ -2.15
VMA16P23968 MAM33YIL070C 801 nt1.65□□□□□ -2.15
VMA16P23968 YMR242W-AYMR242W-A 90 nt1.65□□□□□ -2.15
VMA16P23968 MF(ALPHA)1YPL187W 498 nt1.65□□□□□ -2.15
VMA16P23968 SAS3YBL052C 2496 nt1.64□□□□□ -2.15
VMA16P23968 IRA1YBR140C 9279 nt1.64□□□□□ -2.15
VMA16P23968 PAU3YCR104W 375 nt1.64□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms