Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.34■□□□□ 0.85
XPAP23025 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.34■□□□□ 0.85
XPAP23025 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.34■□□□□ 0.85
XPAP23025 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.34■□□□□ 0.85
XPAP23025 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.34■□□□□ 0.85
XPAP23025 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.34■□□□□ 0.85
XPAP23025 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
XPAP23025 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
XPAP23025 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
XPAP23025 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
XPAP23025 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.33■□□□□ 0.85
XPAP23025 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XPAP23025 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
XPAP23025 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
XPAP23025 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XPAP23025 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
XPAP23025 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XPAP23025 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
XPAP23025 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
XPAP23025 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
XPAP23025 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
XPAP23025 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.33■□□□□ 0.84
XPAP23025 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.32■□□□□ 0.84
XPAP23025 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
XPAP23025 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
XPAP23025 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.32■□□□□ 0.84
XPAP23025 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.32■□□□□ 0.84
XPAP23025 AP003097.1-201ENST00000530657 1135 ntBASIC20.32■□□□□ 0.84
XPAP23025 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.32■□□□□ 0.84
XPAP23025 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 AC138932.1-201ENST00000534164 6830 ntBASIC20.32■□□□□ 0.84
XPAP23025 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
XPAP23025 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
XPAP23025 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
XPAP23025 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
XPAP23025 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
XPAP23025 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 KRT18P29-201ENST00000397031 1267 ntBASIC20.31■□□□□ 0.84
XPAP23025 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.31■□□□□ 0.84
XPAP23025 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.31■□□□□ 0.84
XPAP23025 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.31■□□□□ 0.84
XPAP23025 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.31■□□□□ 0.84
XPAP23025 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 TMEM191A-211ENST00000637163 1067 ntBASIC20.31■□□□□ 0.84
XPAP23025 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
XPAP23025 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
XPAP23025 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
XPAP23025 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.3■□□□□ 0.84
XPAP23025 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
XPAP23025 AC007225.1-201ENST00000566331 1836 ntBASIC20.3■□□□□ 0.84
XPAP23025 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.3■□□□□ 0.84
XPAP23025 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
XPAP23025 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
XPAP23025 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
XPAP23025 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.3■□□□□ 0.84
XPAP23025 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.3■□□□□ 0.84
XPAP23025 AC026366.1-201ENST00000488803 879 ntBASIC20.3■□□□□ 0.84
XPAP23025 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.3■□□□□ 0.84
XPAP23025 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.3■□□□□ 0.84
XPAP23025 SOX15-203ENST00000570788 1093 ntBASIC20.3■□□□□ 0.84
XPAP23025 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.3■□□□□ 0.84
XPAP23025 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.3■□□□□ 0.84
XPAP23025 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.3■□□□□ 0.84
XPAP23025 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
XPAP23025 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms