Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CCL1P22362 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCL1P22362 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL1P22362 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.38■□□□□ 0.37
CCL1P22362 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL1P22362 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL1P22362 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.38■□□□□ 0.37
CCL1P22362 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL1P22362 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL1P22362 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL1P22362 RARRES2P4-201ENST00000514074 484 ntBASIC17.38■□□□□ 0.37
CCL1P22362 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCL1P22362 MFSD11-216ENST00000590393 1141 ntBASIC17.38■□□□□ 0.37
CCL1P22362 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL1P22362 AC087623.3-201ENST00000607047 1098 ntBASIC17.38■□□□□ 0.37
CCL1P22362 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL1P22362 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL1P22362 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL1P22362 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL1P22362 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.38■□□□□ 0.37
CCL1P22362 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL1P22362 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCL1P22362 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCL1P22362 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCL1P22362 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL1P22362 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL1P22362 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CCL1P22362 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL1P22362 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL1P22362 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL1P22362 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL1P22362 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
CCL1P22362 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL1P22362 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.37■□□□□ 0.37
CCL1P22362 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL1P22362 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL1P22362 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL1P22362 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.37■□□□□ 0.37
CCL1P22362 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.37■□□□□ 0.37
CCL1P22362 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL1P22362 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL1P22362 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL1P22362 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL1P22362 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL1P22362 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 MCRIP2P1-201ENST00000394346 511 ntBASIC17.36■□□□□ 0.37
CCL1P22362 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL1P22362 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL1P22362 AC137761.2-201ENST00000561729 223 ntBASIC17.36■□□□□ 0.37
CCL1P22362 AC145350.3-201ENST00000569033 163 ntBASIC17.36■□□□□ 0.37
CCL1P22362 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.36■□□□□ 0.37
CCL1P22362 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCL1P22362 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL1P22362 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCL1P22362 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCL1P22362 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL1P22362 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL1P22362 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL1P22362 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL1P22362 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 KRT18P5-201ENST00000436075 1291 ntBASIC17.35■□□□□ 0.37
CCL1P22362 CNN2P6-201ENST00000439038 900 ntBASIC17.35■□□□□ 0.37
CCL1P22362 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL1P22362 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL1P22362 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL1P22362 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL1P22362 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms