Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
BMP4P12644 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BMP4P12644 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
BMP4P12644 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
BMP4P12644 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.43■□□□□ 0.54
BMP4P12644 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BMP4P12644 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BMP4P12644 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
BMP4P12644 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
BMP4P12644 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 AP004607.4-201ENST00000530158 1459 ntBASIC18.42■□□□□ 0.54
BMP4P12644 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.42■□□□□ 0.54
BMP4P12644 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.42■□□□□ 0.54
BMP4P12644 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.42■□□□□ 0.54
BMP4P12644 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.42■□□□□ 0.54
BMP4P12644 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.42■□□□□ 0.54
BMP4P12644 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
BMP4P12644 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.42■□□□□ 0.54
BMP4P12644 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BMP4P12644 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
BMP4P12644 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP4P12644 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BMP4P12644 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP4P12644 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.41■□□□□ 0.54
BMP4P12644 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP4P12644 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.41■□□□□ 0.54
BMP4P12644 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.41■□□□□ 0.54
BMP4P12644 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.41■□□□□ 0.54
BMP4P12644 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
BMP4P12644 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.41■□□□□ 0.54
BMP4P12644 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.41■□□□□ 0.54
BMP4P12644 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.41■□□□□ 0.54
BMP4P12644 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.41■□□□□ 0.54
BMP4P12644 AL034346.1-201ENST00000568244 1277 ntBASIC18.41■□□□□ 0.54
BMP4P12644 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP4P12644 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP4P12644 AC007225.1-201ENST00000566331 1836 ntBASIC18.41■□□□□ 0.54
BMP4P12644 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BMP4P12644 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BMP4P12644 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP4P12644 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.41■□□□□ 0.54
BMP4P12644 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
BMP4P12644 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
BMP4P12644 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.41■□□□□ 0.54
BMP4P12644 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.4■□□□□ 0.54
BMP4P12644 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP4P12644 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.4■□□□□ 0.54
BMP4P12644 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP4P12644 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.4■□□□□ 0.54
BMP4P12644 AC006015.1-201ENST00000429970 570 ntBASIC18.4■□□□□ 0.54
BMP4P12644 AC079089.2-201ENST00000531211 1277 ntBASIC18.4■□□□□ 0.54
BMP4P12644 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
BMP4P12644 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.4■□□□□ 0.54
BMP4P12644 BID-214ENST00000617586 542 ntTSL 5 BASIC18.4■□□□□ 0.54
BMP4P12644 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 AC005224.4-201ENST00000583262 1652 ntBASIC18.4■□□□□ 0.54
BMP4P12644 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.4■□□□□ 0.54
BMP4P12644 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
BMP4P12644 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BMP4P12644 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 AC004854.2-201ENST00000608450 1441 ntBASIC18.4■□□□□ 0.54
BMP4P12644 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BMP4P12644 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BMP4P12644 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
BMP4P12644 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
BMP4P12644 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BMP4P12644 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BMP4P12644 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BMP4P12644 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.39■□□□□ 0.54
BMP4P12644 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BMP4P12644 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BMP4P12644 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BMP4P12644 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BMP4P12644 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BMP4P12644 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BMP4P12644 AL158211.5-201ENST00000623583 2518 ntBASIC18.39■□□□□ 0.53
BMP4P12644 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BMP4P12644 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.39■□□□□ 0.53
BMP4P12644 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.39■□□□□ 0.53
BMP4P12644 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms