Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
COL11A1P12107 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A1P12107 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A1P12107 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.12■■□□□ 1.29
COL11A1P12107 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A1P12107 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A1P12107 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
COL11A1P12107 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.12■■□□□ 1.29
COL11A1P12107 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A1P12107 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.11■■□□□ 1.29
COL11A1P12107 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A1P12107 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.11■■□□□ 1.29
COL11A1P12107 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.11■■□□□ 1.29
COL11A1P12107 NBPF21P-201ENST00000425093 1451 ntBASIC23.11■■□□□ 1.29
COL11A1P12107 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.11■■□□□ 1.29
COL11A1P12107 AC087499.1-201ENST00000418141 1075 ntBASIC23.11■■□□□ 1.29
COL11A1P12107 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
COL11A1P12107 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL11A1P12107 PRKY-204ENST00000533551 1019 ntBASIC23.11■■□□□ 1.29
COL11A1P12107 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.11■■□□□ 1.29
COL11A1P12107 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
COL11A1P12107 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A1P12107 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A1P12107 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.1■■□□□ 1.29
COL11A1P12107 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.1■■□□□ 1.29
COL11A1P12107 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
COL11A1P12107 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A1P12107 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.1■■□□□ 1.29
COL11A1P12107 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
COL11A1P12107 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A1P12107 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
COL11A1P12107 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A1P12107 TSPY15P-201ENST00000457163 923 ntBASIC23.1■■□□□ 1.29
COL11A1P12107 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.1■■□□□ 1.29
COL11A1P12107 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.1■■□□□ 1.29
COL11A1P12107 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.1■■□□□ 1.29
COL11A1P12107 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A1P12107 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL11A1P12107 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A1P12107 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
COL11A1P12107 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
COL11A1P12107 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A1P12107 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
COL11A1P12107 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A1P12107 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.09■■□□□ 1.29
COL11A1P12107 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.09■■□□□ 1.29
COL11A1P12107 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.09■■□□□ 1.29
COL11A1P12107 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.09■■□□□ 1.29
COL11A1P12107 AL353708.3-201ENST00000610272 989 ntBASIC23.09■■□□□ 1.29
COL11A1P12107 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL11A1P12107 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
COL11A1P12107 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.08■■□□□ 1.29
COL11A1P12107 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
COL11A1P12107 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A1P12107 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A1P12107 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A1P12107 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL11A1P12107 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL11A1P12107 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL11A1P12107 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
COL11A1P12107 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL11A1P12107 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL11A1P12107 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
COL11A1P12107 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.08■■□□□ 1.28
COL11A1P12107 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL11A1P12107 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.08■■□□□ 1.28
COL11A1P12107 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A1P12107 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A1P12107 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.07■■□□□ 1.28
COL11A1P12107 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A1P12107 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.07■■□□□ 1.28
COL11A1P12107 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
COL11A1P12107 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.07■■□□□ 1.28
COL11A1P12107 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A1P12107 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.07■■□□□ 1.28
COL11A1P12107 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.07■■□□□ 1.28
COL11A1P12107 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A1P12107 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A1P12107 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A1P12107 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
COL11A1P12107 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL11A1P12107 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
COL11A1P12107 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A1P12107 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A1P12107 AL353807.1-201ENST00000427475 662 ntBASIC23.06■■□□□ 1.28
COL11A1P12107 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A1P12107 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.06■■□□□ 1.28
COL11A1P12107 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.06■■□□□ 1.28
COL11A1P12107 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A1P12107 KRT17P2-201ENST00000300992 1314 ntBASIC23.06■■□□□ 1.28
COL11A1P12107 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.06■■□□□ 1.28
COL11A1P12107 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL11A1P12107 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.06■■□□□ 1.28
COL11A1P12107 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
COL11A1P12107 AC211429.1-201ENST00000415277 523 ntBASIC23.05■■□□□ 1.28
COL11A1P12107 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.05■■□□□ 1.28
COL11A1P12107 AL031963.3-201ENST00000606441 850 ntBASIC23.05■■□□□ 1.28
COL11A1P12107 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.05■■□□□ 1.28
COL11A1P12107 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms