Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.65■□□□□ 0.42
UBCP0CG48 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.65■□□□□ 0.42
UBCP0CG48 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.65■□□□□ 0.42
UBCP0CG48 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.65■□□□□ 0.42
UBCP0CG48 CDV3P1-201ENST00000471403 739 ntBASIC17.65■□□□□ 0.42
UBCP0CG48 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.65■□□□□ 0.42
UBCP0CG48 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.65■□□□□ 0.42
UBCP0CG48 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBCP0CG48 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.64■□□□□ 0.42
UBCP0CG48 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBCP0CG48 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBCP0CG48 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.64■□□□□ 0.41
UBCP0CG48 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.64■□□□□ 0.41
UBCP0CG48 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.64■□□□□ 0.41
UBCP0CG48 DPP3P2-201ENST00000416030 1696 ntBASIC17.64■□□□□ 0.41
UBCP0CG48 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBCP0CG48 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.63■□□□□ 0.41
UBCP0CG48 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
UBCP0CG48 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.63■□□□□ 0.41
UBCP0CG48 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.63■□□□□ 0.41
UBCP0CG48 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.63■□□□□ 0.41
UBCP0CG48 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.63■□□□□ 0.41
UBCP0CG48 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBCP0CG48 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 AC097381.1-201ENST00000429019 1296 ntBASIC17.63■□□□□ 0.41
UBCP0CG48 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.63■□□□□ 0.41
UBCP0CG48 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBCP0CG48 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 KRT18P14-201ENST00000534205 1250 ntBASIC17.63■□□□□ 0.41
UBCP0CG48 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.63■□□□□ 0.41
UBCP0CG48 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBCP0CG48 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.63■□□□□ 0.41
UBCP0CG48 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UBCP0CG48 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.63■□□□□ 0.41
UBCP0CG48 AC019069.1-201ENST00000610008 1333 ntBASIC17.63■□□□□ 0.41
UBCP0CG48 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
UBCP0CG48 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
UBCP0CG48 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
UBCP0CG48 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBCP0CG48 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.62■□□□□ 0.41
UBCP0CG48 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.62■□□□□ 0.41
UBCP0CG48 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
UBCP0CG48 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 PGM5P4-201ENST00000421970 445 ntBASIC17.62■□□□□ 0.41
UBCP0CG48 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
UBCP0CG48 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.62■□□□□ 0.41
UBCP0CG48 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.62■□□□□ 0.41
UBCP0CG48 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
UBCP0CG48 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.62■□□□□ 0.41
UBCP0CG48 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.62■□□□□ 0.41
UBCP0CG48 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.62■□□□□ 0.41
UBCP0CG48 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.62■□□□□ 0.41
UBCP0CG48 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 AC004854.2-201ENST00000608450 1441 ntBASIC17.62■□□□□ 0.41
UBCP0CG48 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UBCP0CG48 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms