Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.52■□□□□ 0.88
COL4A2P08572 KRT18P57-201ENST00000443599 1254 ntBASIC20.52■□□□□ 0.88
COL4A2P08572 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A2P08572 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A2P08572 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL4A2P08572 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A2P08572 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A2P08572 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A2P08572 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A2P08572 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.51■□□□□ 0.87
COL4A2P08572 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
COL4A2P08572 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A2P08572 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A2P08572 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.51■□□□□ 0.87
COL4A2P08572 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A2P08572 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A2P08572 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A2P08572 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A2P08572 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A2P08572 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.51■□□□□ 0.87
COL4A2P08572 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COL4A2P08572 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A2P08572 TERF1P1-201ENST00000311003 1181 ntBASIC20.5■□□□□ 0.87
COL4A2P08572 AC005521.1-201ENST00000393351 872 ntBASIC20.5■□□□□ 0.87
COL4A2P08572 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.5■□□□□ 0.87
COL4A2P08572 C1QL1P1-201ENST00000568105 661 ntBASIC20.5■□□□□ 0.87
COL4A2P08572 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A2P08572 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.5■□□□□ 0.87
COL4A2P08572 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
COL4A2P08572 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A2P08572 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A2P08572 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A2P08572 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.5■□□□□ 0.87
COL4A2P08572 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A2P08572 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
COL4A2P08572 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A2P08572 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A2P08572 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A2P08572 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.49■□□□□ 0.87
COL4A2P08572 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 AC233723.2-201ENST00000623798 2106 ntBASIC20.49■□□□□ 0.87
COL4A2P08572 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.49■□□□□ 0.87
COL4A2P08572 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 CYP2D8P-201ENST00000433633 1490 ntBASIC20.49■□□□□ 0.87
COL4A2P08572 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
COL4A2P08572 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.49■□□□□ 0.87
COL4A2P08572 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.49■□□□□ 0.87
COL4A2P08572 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL4A2P08572 AL049597.2-201ENST00000565575 961 ntBASIC20.49■□□□□ 0.87
COL4A2P08572 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.49■□□□□ 0.87
COL4A2P08572 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A2P08572 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
COL4A2P08572 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.48■□□□□ 0.87
COL4A2P08572 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.48■□□□□ 0.87
COL4A2P08572 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
COL4A2P08572 SLC25A3P1-201ENST00000443844 931 ntBASIC20.48■□□□□ 0.87
COL4A2P08572 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.48■□□□□ 0.87
COL4A2P08572 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.48■□□□□ 0.87
COL4A2P08572 AC010947.1-201ENST00000623454 693 ntBASIC20.48■□□□□ 0.87
COL4A2P08572 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.48■□□□□ 0.87
COL4A2P08572 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COL4A2P08572 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL4A2P08572 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL4A2P08572 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.47■□□□□ 0.87
COL4A2P08572 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.47■□□□□ 0.87
COL4A2P08572 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL4A2P08572 AC133561.1-201ENST00000568600 2415 ntBASIC20.47■□□□□ 0.87
COL4A2P08572 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL4A2P08572 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.47■□□□□ 0.87
COL4A2P08572 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.47■□□□□ 0.87
COL4A2P08572 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL4A2P08572 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.47■□□□□ 0.87
COL4A2P08572 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL4A2P08572 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A2P08572 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.46■□□□□ 0.87
COL4A2P08572 AC073508.3-201ENST00000619697 1419 ntBASIC20.46■□□□□ 0.87
COL4A2P08572 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL4A2P08572 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
COL4A2P08572 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.46■□□□□ 0.87
COL4A2P08572 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A2P08572 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A2P08572 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms