Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.8■■□□□ 1.88
COL5A2P05997 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.79■■□□□ 1.88
COL5A2P05997 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.79■■□□□ 1.88
COL5A2P05997 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL5A2P05997 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.79■■□□□ 1.88
COL5A2P05997 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.79■■□□□ 1.88
COL5A2P05997 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL5A2P05997 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL5A2P05997 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL5A2P05997 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC26.79■■□□□ 1.88
COL5A2P05997 AC104076.2-201ENST00000448912 469 ntBASIC26.79■■□□□ 1.88
COL5A2P05997 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC26.79■■□□□ 1.88
COL5A2P05997 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
COL5A2P05997 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC26.79■■□□□ 1.88
COL5A2P05997 CR392000.1-201ENST00000624770 1228 ntBASIC26.79■■□□□ 1.88
COL5A2P05997 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL5A2P05997 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
COL5A2P05997 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL5A2P05997 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL5A2P05997 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC26.78■■□□□ 1.88
COL5A2P05997 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL5A2P05997 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL5A2P05997 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC26.78■■□□□ 1.88
COL5A2P05997 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC26.78■■□□□ 1.88
COL5A2P05997 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
COL5A2P05997 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
COL5A2P05997 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL5A2P05997 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
COL5A2P05997 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL5A2P05997 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COL5A2P05997 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL5A2P05997 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL5A2P05997 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
COL5A2P05997 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COL5A2P05997 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC26.77■■□□□ 1.88
COL5A2P05997 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COL5A2P05997 WWOX-216ENST00000569818 525 ntBASIC26.77■■□□□ 1.88
COL5A2P05997 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC26.77■■□□□ 1.88
COL5A2P05997 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL5A2P05997 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.77■■□□□ 1.88
COL5A2P05997 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
COL5A2P05997 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
COL5A2P05997 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COL5A2P05997 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL5A2P05997 MESTP1-201ENST00000404287 994 ntBASIC26.76■■□□□ 1.87
COL5A2P05997 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL5A2P05997 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC26.76■■□□□ 1.87
COL5A2P05997 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.76■■□□□ 1.87
COL5A2P05997 LTBR-211ENST00000543190 785 ntTSL 3 BASIC26.76■■□□□ 1.87
COL5A2P05997 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC26.76■■□□□ 1.87
COL5A2P05997 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC26.76■■□□□ 1.87
COL5A2P05997 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL5A2P05997 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
COL5A2P05997 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL5A2P05997 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC26.75■■□□□ 1.87
COL5A2P05997 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC26.75■■□□□ 1.87
COL5A2P05997 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL5A2P05997 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
COL5A2P05997 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
COL5A2P05997 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL5A2P05997 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
COL5A2P05997 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL5A2P05997 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL5A2P05997 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL5A2P05997 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC26.74■■□□□ 1.87
COL5A2P05997 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.74■■□□□ 1.87
COL5A2P05997 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL5A2P05997 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL5A2P05997 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC26.74■■□□□ 1.87
COL5A2P05997 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL5A2P05997 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL5A2P05997 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL5A2P05997 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC26.74■■□□□ 1.87
COL5A2P05997 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.74■■□□□ 1.87
COL5A2P05997 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL5A2P05997 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC26.74■■□□□ 1.87
COL5A2P05997 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC26.74■■□□□ 1.87
COL5A2P05997 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC26.74■■□□□ 1.87
COL5A2P05997 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL5A2P05997 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
COL5A2P05997 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.74■■□□□ 1.87
COL5A2P05997 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL5A2P05997 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.73■■□□□ 1.87
COL5A2P05997 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL5A2P05997 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.73■■□□□ 1.87
COL5A2P05997 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
COL5A2P05997 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL5A2P05997 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL5A2P05997 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC26.73■■□□□ 1.87
COL5A2P05997 C1QL1P1-201ENST00000568105 661 ntBASIC26.73■■□□□ 1.87
COL5A2P05997 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC26.73■■□□□ 1.87
COL5A2P05997 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
COL5A2P05997 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL5A2P05997 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL5A2P05997 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
COL5A2P05997 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
COL5A2P05997 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL5A2P05997 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL5A2P05997 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL5A2P05997 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms