Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.39■■□□□ 1.17
CD4P01730 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CD4P01730 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.38■■□□□ 1.17
CD4P01730 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.38■■□□□ 1.17
CD4P01730 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CD4P01730 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
CD4P01730 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.38■■□□□ 1.17
CD4P01730 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.38■■□□□ 1.17
CD4P01730 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.38■■□□□ 1.17
CD4P01730 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.38■■□□□ 1.17
CD4P01730 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.38■■□□□ 1.17
CD4P01730 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CD4P01730 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.37■■□□□ 1.17
CD4P01730 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CD4P01730 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CD4P01730 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.37■■□□□ 1.17
CD4P01730 AL353807.1-201ENST00000427475 662 ntBASIC22.37■■□□□ 1.17
CD4P01730 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CD4P01730 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CD4P01730 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CD4P01730 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.37■■□□□ 1.17
CD4P01730 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.37■■□□□ 1.17
CD4P01730 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.37■■□□□ 1.17
CD4P01730 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CD4P01730 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.37■■□□□ 1.17
CD4P01730 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CD4P01730 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.37■■□□□ 1.17
CD4P01730 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CD4P01730 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.36■■□□□ 1.17
CD4P01730 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.36■■□□□ 1.17
CD4P01730 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CD4P01730 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.36■■□□□ 1.17
CD4P01730 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.36■■□□□ 1.17
CD4P01730 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CD4P01730 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CD4P01730 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.36■■□□□ 1.17
CD4P01730 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.36■■□□□ 1.17
CD4P01730 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CD4P01730 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CD4P01730 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.36■■□□□ 1.17
CD4P01730 AC145285.6-201ENST00000604632 637 ntBASIC22.36■■□□□ 1.17
CD4P01730 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.36■■□□□ 1.17
CD4P01730 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CD4P01730 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.36■■□□□ 1.17
CD4P01730 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.36■■□□□ 1.17
CD4P01730 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CD4P01730 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CD4P01730 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.35■■□□□ 1.17
CD4P01730 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CD4P01730 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CD4P01730 FAM197Y1-201ENST00000421178 764 ntBASIC22.35■■□□□ 1.17
CD4P01730 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.35■■□□□ 1.17
CD4P01730 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.35■■□□□ 1.17
CD4P01730 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.35■■□□□ 1.17
CD4P01730 AC092865.7-201ENST00000641832 219 ntBASIC22.35■■□□□ 1.17
CD4P01730 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.35■■□□□ 1.17
CD4P01730 NBPF21P-201ENST00000425093 1451 ntBASIC22.34■■□□□ 1.17
CD4P01730 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
CD4P01730 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.34■■□□□ 1.17
CD4P01730 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CD4P01730 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.34■■□□□ 1.17
CD4P01730 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.34■■□□□ 1.17
CD4P01730 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CD4P01730 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
CD4P01730 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.34■■□□□ 1.17
CD4P01730 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.34■■□□□ 1.17
CD4P01730 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.34■■□□□ 1.17
CD4P01730 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CD4P01730 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CD4P01730 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.34■■□□□ 1.17
CD4P01730 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.33■■□□□ 1.17
CD4P01730 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CD4P01730 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CD4P01730 Z98882.1-201ENST00000622160 2253 ntBASIC22.33■■□□□ 1.17
CD4P01730 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CD4P01730 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.33■■□□□ 1.17
CD4P01730 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CD4P01730 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.33■■□□□ 1.17
CD4P01730 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.33■■□□□ 1.17
CD4P01730 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CD4P01730 AC023632.3-201ENST00000521633 145 ntBASIC22.33■■□□□ 1.17
CD4P01730 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CD4P01730 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms