Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
IFNB1P01574 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IFNB1P01574 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IFNB1P01574 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.83■□□□□ 0.93
IFNB1P01574 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
IFNB1P01574 MYCNOS-205ENST00000641950 531 ntBASIC20.83■□□□□ 0.93
IFNB1P01574 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
IFNB1P01574 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
IFNB1P01574 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
IFNB1P01574 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IFNB1P01574 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
IFNB1P01574 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.83■□□□□ 0.92
IFNB1P01574 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IFNB1P01574 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
IFNB1P01574 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.82■□□□□ 0.92
IFNB1P01574 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
IFNB1P01574 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.82■□□□□ 0.92
IFNB1P01574 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.82■□□□□ 0.92
IFNB1P01574 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
IFNB1P01574 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.82■□□□□ 0.92
IFNB1P01574 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
IFNB1P01574 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
IFNB1P01574 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.82■□□□□ 0.92
IFNB1P01574 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
IFNB1P01574 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
IFNB1P01574 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.82■□□□□ 0.92
IFNB1P01574 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IFNB1P01574 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.81■□□□□ 0.92
IFNB1P01574 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.81■□□□□ 0.92
IFNB1P01574 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.81■□□□□ 0.92
IFNB1P01574 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.81■□□□□ 0.92
IFNB1P01574 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.81■□□□□ 0.92
IFNB1P01574 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.81■□□□□ 0.92
IFNB1P01574 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.81■□□□□ 0.92
IFNB1P01574 NTF6G-201ENST00000591094 616 ntBASIC20.81■□□□□ 0.92
IFNB1P01574 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.81■□□□□ 0.92
IFNB1P01574 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.81■□□□□ 0.92
IFNB1P01574 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
IFNB1P01574 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.81■□□□□ 0.92
IFNB1P01574 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.81■□□□□ 0.92
IFNB1P01574 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.81■□□□□ 0.92
IFNB1P01574 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.81■□□□□ 0.92
IFNB1P01574 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IFNB1P01574 AC007952.6-201ENST00000573168 2673 ntBASIC20.81■□□□□ 0.92
IFNB1P01574 AC003957.1-201ENST00000625108 2673 ntBASIC20.81■□□□□ 0.92
IFNB1P01574 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.8■□□□□ 0.92
IFNB1P01574 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
IFNB1P01574 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
IFNB1P01574 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.8■□□□□ 0.92
IFNB1P01574 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFNB1P01574 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
IFNB1P01574 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
IFNB1P01574 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
IFNB1P01574 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
IFNB1P01574 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFNB1P01574 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFNB1P01574 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.79■□□□□ 0.92
IFNB1P01574 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IFNB1P01574 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.79■□□□□ 0.92
IFNB1P01574 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IFNB1P01574 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
IFNB1P01574 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFNB1P01574 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IFNB1P01574 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.79■□□□□ 0.92
IFNB1P01574 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.79■□□□□ 0.92
IFNB1P01574 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.79■□□□□ 0.92
IFNB1P01574 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFNB1P01574 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.79■□□□□ 0.92
IFNB1P01574 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IFNB1P01574 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms