Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP3BO95985 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP3BO95985 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.63■□□□□ 0.89
TOP3BO95985 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP3BO95985 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TOP3BO95985 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.62■□□□□ 0.89
TOP3BO95985 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TOP3BO95985 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TOP3BO95985 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.62■□□□□ 0.89
TOP3BO95985 AC091874.3-201ENST00000512672 1195 ntBASIC20.62■□□□□ 0.89
TOP3BO95985 KRT18P21-201ENST00000515767 1272 ntBASIC20.62■□□□□ 0.89
TOP3BO95985 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.62■□□□□ 0.89
TOP3BO95985 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.62■□□□□ 0.89
TOP3BO95985 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TOP3BO95985 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.62■□□□□ 0.89
TOP3BO95985 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
TOP3BO95985 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP3BO95985 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP3BO95985 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP3BO95985 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP3BO95985 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP3BO95985 FP700111.2-201ENST00000619190 1892 ntBASIC20.61■□□□□ 0.89
TOP3BO95985 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TOP3BO95985 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.61■□□□□ 0.89
TOP3BO95985 AC026366.1-201ENST00000488803 879 ntBASIC20.61■□□□□ 0.89
TOP3BO95985 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.61■□□□□ 0.89
TOP3BO95985 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP3BO95985 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.61■□□□□ 0.89
TOP3BO95985 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP3BO95985 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP3BO95985 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP3BO95985 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP3BO95985 AL512408.1-201ENST00000569378 2000 ntBASIC20.61■□□□□ 0.89
TOP3BO95985 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.61■□□□□ 0.89
TOP3BO95985 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.61■□□□□ 0.89
TOP3BO95985 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TOP3BO95985 AC020907.5-201ENST00000624372 1936 ntBASIC20.61■□□□□ 0.89
TOP3BO95985 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.6■□□□□ 0.89
TOP3BO95985 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TOP3BO95985 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TOP3BO95985 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 AL512625.2-201ENST00000417533 625 ntBASIC20.6■□□□□ 0.89
TOP3BO95985 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.6■□□□□ 0.89
TOP3BO95985 KRT18P20-201ENST00000548986 1279 ntBASIC20.6■□□□□ 0.89
TOP3BO95985 AC138907.5-202ENST00000569484 235 ntBASIC20.6■□□□□ 0.89
TOP3BO95985 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.6■□□□□ 0.89
TOP3BO95985 AL359736.2-201ENST00000621992 437 ntBASIC20.6■□□□□ 0.89
TOP3BO95985 AC008694.1-202ENST00000636953 945 ntBASIC20.6■□□□□ 0.89
TOP3BO95985 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TOP3BO95985 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.6■□□□□ 0.89
TOP3BO95985 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TOP3BO95985 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.6■□□□□ 0.89
TOP3BO95985 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TOP3BO95985 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TOP3BO95985 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TOP3BO95985 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.59■□□□□ 0.89
TOP3BO95985 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP3BO95985 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TOP3BO95985 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.59■□□□□ 0.89
TOP3BO95985 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP3BO95985 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TOP3BO95985 UBE2SP1-201ENST00000450587 669 ntBASIC20.59■□□□□ 0.89
TOP3BO95985 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TOP3BO95985 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.59■□□□□ 0.89
TOP3BO95985 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TOP3BO95985 REXO1L12P-201ENST00000622156 912 ntBASIC20.59■□□□□ 0.89
TOP3BO95985 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TOP3BO95985 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP3BO95985 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TOP3BO95985 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
TOP3BO95985 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.58■□□□□ 0.89
TOP3BO95985 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TOP3BO95985 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TOP3BO95985 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms