Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.23■□□□□ 0.99
BEST1O76090 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
BEST1O76090 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.23■□□□□ 0.99
BEST1O76090 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.23■□□□□ 0.99
BEST1O76090 AL157384.1-201ENST00000445995 2473 ntBASIC21.22■□□□□ 0.99
BEST1O76090 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.22■□□□□ 0.99
BEST1O76090 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.22■□□□□ 0.99
BEST1O76090 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.22■□□□□ 0.99
BEST1O76090 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.22■□□□□ 0.99
BEST1O76090 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 AC006058.3-201ENST00000606217 1069 ntBASIC21.22■□□□□ 0.99
BEST1O76090 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.22■□□□□ 0.99
BEST1O76090 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 AC092667.1-201ENST00000434301 2586 ntBASIC21.22■□□□□ 0.99
BEST1O76090 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
BEST1O76090 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
BEST1O76090 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.21■□□□□ 0.99
BEST1O76090 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.21■□□□□ 0.99
BEST1O76090 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
BEST1O76090 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.21■□□□□ 0.99
BEST1O76090 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 AC023632.3-201ENST00000521633 145 ntBASIC21.21■□□□□ 0.99
BEST1O76090 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.21■□□□□ 0.99
BEST1O76090 ITM2C-210ENST00000620962 501 ntBASIC21.21■□□□□ 0.99
BEST1O76090 TMEM191A-211ENST00000637163 1067 ntBASIC21.21■□□□□ 0.99
BEST1O76090 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 AC020907.5-201ENST00000624372 1936 ntBASIC21.21■□□□□ 0.99
BEST1O76090 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.21■□□□□ 0.99
BEST1O76090 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BEST1O76090 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.2■□□□□ 0.98
BEST1O76090 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
BEST1O76090 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.2■□□□□ 0.98
BEST1O76090 AP005212.1-201ENST00000581547 1997 ntBASIC21.2■□□□□ 0.98
BEST1O76090 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
BEST1O76090 AC233263.1-201ENST00000578059 224 ntBASIC21.2■□□□□ 0.98
BEST1O76090 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.2■□□□□ 0.98
BEST1O76090 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
BEST1O76090 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.2■□□□□ 0.98
BEST1O76090 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.2■□□□□ 0.98
BEST1O76090 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
BEST1O76090 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
BEST1O76090 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.2■□□□□ 0.98
BEST1O76090 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BEST1O76090 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.2■□□□□ 0.98
BEST1O76090 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
BEST1O76090 PRORSD1P-201ENST00000295112 541 ntBASIC21.19■□□□□ 0.98
BEST1O76090 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
BEST1O76090 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
BEST1O76090 AC128676.1-201ENST00000454392 318 ntBASIC21.19■□□□□ 0.98
BEST1O76090 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.19■□□□□ 0.98
BEST1O76090 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.19■□□□□ 0.98
BEST1O76090 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.19■□□□□ 0.98
BEST1O76090 AC008687.6-201ENST00000596318 630 ntBASIC21.19■□□□□ 0.98
BEST1O76090 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
BEST1O76090 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms