Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.06■□□□□ 0.64
URB1O60287 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.06■□□□□ 0.64
URB1O60287 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
URB1O60287 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.06■□□□□ 0.64
URB1O60287 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
URB1O60287 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
URB1O60287 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.06■□□□□ 0.64
URB1O60287 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
URB1O60287 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
URB1O60287 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.05■□□□□ 0.64
URB1O60287 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.05■□□□□ 0.64
URB1O60287 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.05■□□□□ 0.64
URB1O60287 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.05■□□□□ 0.64
URB1O60287 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
URB1O60287 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.05■□□□□ 0.64
URB1O60287 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
URB1O60287 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
URB1O60287 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
URB1O60287 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 AL121829.2-201ENST00000620908 328 ntBASIC19.05■□□□□ 0.64
URB1O60287 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.04■□□□□ 0.64
URB1O60287 DUSP5P1-201ENST00000441325 1139 ntBASIC19.04■□□□□ 0.64
URB1O60287 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.04■□□□□ 0.64
URB1O60287 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.04■□□□□ 0.64
URB1O60287 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
URB1O60287 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
URB1O60287 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.03■□□□□ 0.64
URB1O60287 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.03■□□□□ 0.64
URB1O60287 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.03■□□□□ 0.64
URB1O60287 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.03■□□□□ 0.64
URB1O60287 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.03■□□□□ 0.64
URB1O60287 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.02■□□□□ 0.64
URB1O60287 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.02■□□□□ 0.64
URB1O60287 NAPSB-206ENST00000562112 1266 ntBASIC19.02■□□□□ 0.64
URB1O60287 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.02■□□□□ 0.64
URB1O60287 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
URB1O60287 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
URB1O60287 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
URB1O60287 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
URB1O60287 AC124283.5-201ENST00000624661 1809 ntBASIC19.02■□□□□ 0.63
URB1O60287 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms