Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.06■□□□□ 0.64
URB1O60287 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.06■□□□□ 0.64
URB1O60287 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
URB1O60287 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.06■□□□□ 0.64
URB1O60287 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
URB1O60287 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
URB1O60287 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.06■□□□□ 0.64
URB1O60287 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
URB1O60287 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
URB1O60287 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.05■□□□□ 0.64
URB1O60287 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.05■□□□□ 0.64
URB1O60287 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.05■□□□□ 0.64
URB1O60287 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.05■□□□□ 0.64
URB1O60287 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
URB1O60287 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.05■□□□□ 0.64
URB1O60287 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
URB1O60287 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
URB1O60287 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
URB1O60287 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 AL121829.2-201ENST00000620908 328 ntBASIC19.05■□□□□ 0.64
URB1O60287 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.05■□□□□ 0.64
URB1O60287 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
URB1O60287 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.04■□□□□ 0.64
URB1O60287 DUSP5P1-201ENST00000441325 1139 ntBASIC19.04■□□□□ 0.64
URB1O60287 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.04■□□□□ 0.64
URB1O60287 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.04■□□□□ 0.64
URB1O60287 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.04■□□□□ 0.64
URB1O60287 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
URB1O60287 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
URB1O60287 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
URB1O60287 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.03■□□□□ 0.64
URB1O60287 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.03■□□□□ 0.64
URB1O60287 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.03■□□□□ 0.64
URB1O60287 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.03■□□□□ 0.64
URB1O60287 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.03■□□□□ 0.64
URB1O60287 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
URB1O60287 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.02■□□□□ 0.64
URB1O60287 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.02■□□□□ 0.64
URB1O60287 NAPSB-206ENST00000562112 1266 ntBASIC19.02■□□□□ 0.64
URB1O60287 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.02■□□□□ 0.64
URB1O60287 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
URB1O60287 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
URB1O60287 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
URB1O60287 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
URB1O60287 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
URB1O60287 AC124283.5-201ENST00000624661 1809 ntBASIC19.02■□□□□ 0.63
URB1O60287 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms