Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXS1O43638 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXS1O43638 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXS1O43638 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.03■□□□□ 0.64
FOXS1O43638 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXS1O43638 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXS1O43638 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXS1O43638 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXS1O43638 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.03■□□□□ 0.64
FOXS1O43638 AC006058.3-201ENST00000606217 1069 ntBASIC19.03■□□□□ 0.64
FOXS1O43638 TMEM191A-211ENST00000637163 1067 ntBASIC19.03■□□□□ 0.64
FOXS1O43638 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXS1O43638 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
FOXS1O43638 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXS1O43638 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXS1O43638 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXS1O43638 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
FOXS1O43638 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
FOXS1O43638 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXS1O43638 AL390719.1-204ENST00000412397 1219 ntBASIC19.02■□□□□ 0.64
FOXS1O43638 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.02■□□□□ 0.64
FOXS1O43638 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXS1O43638 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.02■□□□□ 0.64
FOXS1O43638 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXS1O43638 AC008687.6-201ENST00000596318 630 ntBASIC19.02■□□□□ 0.64
FOXS1O43638 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.02■□□□□ 0.64
FOXS1O43638 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
FOXS1O43638 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FOXS1O43638 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
FOXS1O43638 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
FOXS1O43638 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.02■□□□□ 0.63
FOXS1O43638 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
FOXS1O43638 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 AC073314.1-201ENST00000568729 2216 ntBASIC19.01■□□□□ 0.63
FOXS1O43638 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
FOXS1O43638 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.01■□□□□ 0.63
FOXS1O43638 AC128676.1-201ENST00000454392 318 ntBASIC19.01■□□□□ 0.63
FOXS1O43638 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXS1O43638 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXS1O43638 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.01■□□□□ 0.63
FOXS1O43638 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FOXS1O43638 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19■□□□□ 0.63
FOXS1O43638 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 KRT18P29-201ENST00000397031 1267 ntBASIC19■□□□□ 0.63
FOXS1O43638 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
FOXS1O43638 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19■□□□□ 0.63
FOXS1O43638 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19■□□□□ 0.63
FOXS1O43638 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19■□□□□ 0.63
FOXS1O43638 AC120498.8-201ENST00000614275 531 ntBASIC19■□□□□ 0.63
FOXS1O43638 AC073648.6-201ENST00000641589 218 ntBASIC19■□□□□ 0.63
FOXS1O43638 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19■□□□□ 0.63
FOXS1O43638 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19■□□□□ 0.63
FOXS1O43638 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19■□□□□ 0.63
FOXS1O43638 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXS1O43638 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXS1O43638 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXS1O43638 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXS1O43638 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXS1O43638 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
FOXS1O43638 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXS1O43638 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
FOXS1O43638 PRORSD1P-201ENST00000295112 541 ntBASIC18.99■□□□□ 0.63
FOXS1O43638 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXS1O43638 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
FOXS1O43638 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXS1O43638 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
FOXS1O43638 AC020907.5-201ENST00000624372 1936 ntBASIC18.99■□□□□ 0.63
FOXS1O43638 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms