Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GABARAPL3-202ENST00000624044 1851 ntBASIC17.36■□□□□ 0.37
PHF1O43189 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PHF1O43189 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.36■□□□□ 0.37
PHF1O43189 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.36■□□□□ 0.37
PHF1O43189 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.36■□□□□ 0.37
PHF1O43189 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.36■□□□□ 0.37
PHF1O43189 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.36■□□□□ 0.37
PHF1O43189 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.36■□□□□ 0.37
PHF1O43189 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHF1O43189 AC006128.1-201ENST00000624704 1661 ntBASIC17.36■□□□□ 0.37
PHF1O43189 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PHF1O43189 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHF1O43189 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.35■□□□□ 0.37
PHF1O43189 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.35■□□□□ 0.37
PHF1O43189 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PHF1O43189 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PHF1O43189 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHF1O43189 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHF1O43189 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.35■□□□□ 0.37
PHF1O43189 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
PHF1O43189 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PHF1O43189 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHF1O43189 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHF1O43189 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.35■□□□□ 0.37
PHF1O43189 MKRN4P-201ENST00000444706 1521 ntBASIC17.35■□□□□ 0.37
PHF1O43189 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHF1O43189 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
PHF1O43189 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHF1O43189 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.35■□□□□ 0.37
PHF1O43189 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHF1O43189 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.35■□□□□ 0.37
PHF1O43189 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PHF1O43189 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PHF1O43189 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
PHF1O43189 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.34■□□□□ 0.37
PHF1O43189 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PHF1O43189 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PHF1O43189 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.34■□□□□ 0.37
PHF1O43189 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.34■□□□□ 0.37
PHF1O43189 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.34■□□□□ 0.37
PHF1O43189 AC068338.2-201ENST00000563278 1430 ntBASIC17.34■□□□□ 0.37
PHF1O43189 RBM17P2-201ENST00000616397 1405 ntBASIC17.34■□□□□ 0.37
PHF1O43189 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PHF1O43189 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PHF1O43189 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHF1O43189 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHF1O43189 AP005212.1-201ENST00000581547 1997 ntBASIC17.33■□□□□ 0.37
PHF1O43189 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHF1O43189 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PHF1O43189 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
PHF1O43189 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHF1O43189 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PHF1O43189 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PHF1O43189 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.33■□□□□ 0.36
PHF1O43189 MIR1224-201ENST00000408193 85 ntBASIC17.33■□□□□ 0.36
PHF1O43189 CYP2T1P-201ENST00000432607 1285 ntBASIC17.33■□□□□ 0.36
PHF1O43189 UNC93B4-201ENST00000505679 747 ntBASIC17.33■□□□□ 0.36
PHF1O43189 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHF1O43189 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.33■□□□□ 0.36
PHF1O43189 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.33■□□□□ 0.36
PHF1O43189 AC006058.3-201ENST00000606217 1069 ntBASIC17.33■□□□□ 0.36
PHF1O43189 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHF1O43189 AC073314.1-201ENST00000568729 2216 ntBASIC17.33■□□□□ 0.36
PHF1O43189 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHF1O43189 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PHF1O43189 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.33■□□□□ 0.36
PHF1O43189 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PHF1O43189 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PHF1O43189 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.32■□□□□ 0.36
PHF1O43189 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PHF1O43189 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.32■□□□□ 0.36
PHF1O43189 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.32■□□□□ 0.36
PHF1O43189 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.32■□□□□ 0.36
PHF1O43189 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.32■□□□□ 0.36
PHF1O43189 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.32■□□□□ 0.36
PHF1O43189 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.32■□□□□ 0.36
PHF1O43189 AC092118.2-201ENST00000613495 667 ntBASIC17.32■□□□□ 0.36
PHF1O43189 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PHF1O43189 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms