Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MID1O15344 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
MID1O15344 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.27■□□□□ 0.84
MID1O15344 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MID1O15344 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.27■□□□□ 0.84
MID1O15344 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
MID1O15344 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MID1O15344 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MID1O15344 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MID1O15344 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MID1O15344 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MID1O15344 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MID1O15344 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MID1O15344 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MID1O15344 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MID1O15344 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
MID1O15344 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.26■□□□□ 0.83
MID1O15344 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MID1O15344 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.26■□□□□ 0.83
MID1O15344 AC023632.3-201ENST00000521633 145 ntBASIC20.26■□□□□ 0.83
MID1O15344 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.26■□□□□ 0.83
MID1O15344 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
MID1O15344 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MID1O15344 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MID1O15344 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MID1O15344 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.26■□□□□ 0.83
MID1O15344 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.25■□□□□ 0.83
MID1O15344 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.25■□□□□ 0.83
MID1O15344 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MID1O15344 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.25■□□□□ 0.83
MID1O15344 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.25■□□□□ 0.83
MID1O15344 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MID1O15344 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.25■□□□□ 0.83
MID1O15344 KRASP1-201ENST00000407852 552 ntBASIC20.25■□□□□ 0.83
MID1O15344 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MID1O15344 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.25■□□□□ 0.83
MID1O15344 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.25■□□□□ 0.83
MID1O15344 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.25■□□□□ 0.83
MID1O15344 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MID1O15344 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MID1O15344 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.25■□□□□ 0.83
MID1O15344 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MID1O15344 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MID1O15344 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MID1O15344 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MID1O15344 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MID1O15344 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MID1O15344 AC133681.1-201ENST00000465482 601 ntBASIC20.24■□□□□ 0.83
MID1O15344 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.24■□□□□ 0.83
MID1O15344 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MID1O15344 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.24■□□□□ 0.83
MID1O15344 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
MID1O15344 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.24■□□□□ 0.83
MID1O15344 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MID1O15344 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.24■□□□□ 0.83
MID1O15344 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MID1O15344 AL121603.2-201ENST00000557373 2117 ntBASIC20.23■□□□□ 0.83
MID1O15344 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MID1O15344 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MID1O15344 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.23■□□□□ 0.83
MID1O15344 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.23■□□□□ 0.83
MID1O15344 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.23■□□□□ 0.83
MID1O15344 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.23■□□□□ 0.83
MID1O15344 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.23■□□□□ 0.83
MID1O15344 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.23■□□□□ 0.83
MID1O15344 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.23■□□□□ 0.83
MID1O15344 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.23■□□□□ 0.83
MID1O15344 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
MID1O15344 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MID1O15344 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MID1O15344 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MID1O15344 AC124283.5-201ENST00000624661 1809 ntBASIC20.23■□□□□ 0.83
MID1O15344 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.22■□□□□ 0.83
MID1O15344 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.22■□□□□ 0.83
MID1O15344 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.22■□□□□ 0.83
MID1O15344 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.22■□□□□ 0.83
MID1O15344 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MID1O15344 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MID1O15344 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MID1O15344 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MID1O15344 AC026310.3-201ENST00000625186 2373 ntBASIC20.21■□□□□ 0.83
MID1O15344 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MID1O15344 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MID1O15344 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MID1O15344 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.21■□□□□ 0.83
MID1O15344 MIR4497-201ENST00000583208 89 ntBASIC20.21■□□□□ 0.83
MID1O15344 AC110285.5-201ENST00000611501 352 ntBASIC20.21■□□□□ 0.83
MID1O15344 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MID1O15344 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MID1O15344 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MID1O15344 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms