Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 KRT8P9-201ENST00000558927 1449 ntBASIC13.47□□□□□ -0.25
RTL8CO15255 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
RTL8CO15255 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RTL8CO15255 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
RTL8CO15255 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RTL8CO15255 AC005521.1-201ENST00000393351 872 ntBASIC13.47□□□□□ -0.25
RTL8CO15255 RBM17P1-201ENST00000453646 1190 ntBASIC13.47□□□□□ -0.25
RTL8CO15255 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.47□□□□□ -0.25
RTL8CO15255 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.47□□□□□ -0.25
RTL8CO15255 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.47□□□□□ -0.25
RTL8CO15255 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.47□□□□□ -0.25
RTL8CO15255 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.47□□□□□ -0.25
RTL8CO15255 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RTL8CO15255 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTL8CO15255 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
RTL8CO15255 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.46□□□□□ -0.25
RTL8CO15255 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.46□□□□□ -0.25
RTL8CO15255 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RTL8CO15255 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.46□□□□□ -0.25
RTL8CO15255 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.46□□□□□ -0.25
RTL8CO15255 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.46□□□□□ -0.25
RTL8CO15255 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.46□□□□□ -0.25
RTL8CO15255 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.46□□□□□ -0.25
RTL8CO15255 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.46□□□□□ -0.25
RTL8CO15255 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.46□□□□□ -0.25
RTL8CO15255 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.46□□□□□ -0.25
RTL8CO15255 AC073195.1-201ENST00000607241 877 ntBASIC13.46□□□□□ -0.25
RTL8CO15255 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 NBPF21P-201ENST00000425093 1451 ntBASIC13.46□□□□□ -0.25
RTL8CO15255 AC079598.2-202ENST00000546624 1451 ntBASIC13.46□□□□□ -0.25
RTL8CO15255 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTL8CO15255 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTL8CO15255 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTL8CO15255 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTL8CO15255 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTL8CO15255 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.45□□□□□ -0.26
RTL8CO15255 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC13.45□□□□□ -0.26
RTL8CO15255 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.45□□□□□ -0.26
RTL8CO15255 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.45□□□□□ -0.26
RTL8CO15255 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.45□□□□□ -0.26
RTL8CO15255 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.45□□□□□ -0.26
RTL8CO15255 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.45□□□□□ -0.26
RTL8CO15255 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.45□□□□□ -0.26
RTL8CO15255 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.45□□□□□ -0.26
RTL8CO15255 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.45□□□□□ -0.26
RTL8CO15255 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RTL8CO15255 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.45□□□□□ -0.26
RTL8CO15255 AP000525.1-201ENST00000608286 694 ntBASIC13.45□□□□□ -0.26
RTL8CO15255 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.45□□□□□ -0.26
RTL8CO15255 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC13.45□□□□□ -0.26
RTL8CO15255 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RTL8CO15255 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTL8CO15255 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTL8CO15255 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTL8CO15255 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTL8CO15255 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTL8CO15255 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms