Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1AO00555 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CACNA1AO00555 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1AO00555 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CACNA1AO00555 AC097488.1-201ENST00000507834 756 ntBASIC19.22■□□□□ 0.67
CACNA1AO00555 HYMAI.1-201ENST00000620949 238 ntBASIC19.22■□□□□ 0.67
CACNA1AO00555 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNA1AO00555 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1AO00555 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.22■□□□□ 0.67
CACNA1AO00555 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNA1AO00555 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1AO00555 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1AO00555 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA1AO00555 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1AO00555 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1AO00555 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1AO00555 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA1AO00555 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1AO00555 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1AO00555 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CACNA1AO00555 AC004951.3-201ENST00000418645 1148 ntBASIC19.21■□□□□ 0.67
CACNA1AO00555 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1AO00555 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.21■□□□□ 0.67
CACNA1AO00555 SLC25A6P4-201ENST00000586535 553 ntBASIC19.21■□□□□ 0.67
CACNA1AO00555 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNA1AO00555 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1AO00555 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1AO00555 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CACNA1AO00555 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNA1AO00555 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNA1AO00555 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNA1AO00555 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1AO00555 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1AO00555 AC007663.1-201ENST00000438948 1240 ntBASIC19.2■□□□□ 0.66
CACNA1AO00555 AC011506.1-201ENST00000474329 610 ntBASIC19.2■□□□□ 0.66
CACNA1AO00555 AL160237.2-201ENST00000556165 472 ntBASIC19.2■□□□□ 0.66
CACNA1AO00555 MIR3180-1-201ENST00000580374 94 ntBASIC19.2■□□□□ 0.66
CACNA1AO00555 MIR3180-3-201ENST00000584616 94 ntBASIC19.2■□□□□ 0.66
CACNA1AO00555 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.2■□□□□ 0.66
CACNA1AO00555 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1AO00555 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CACNA1AO00555 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1AO00555 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNA1AO00555 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.2■□□□□ 0.66
CACNA1AO00555 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
CACNA1AO00555 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1AO00555 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1AO00555 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.2■□□□□ 0.66
CACNA1AO00555 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1AO00555 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
CACNA1AO00555 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CACNA1AO00555 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
CACNA1AO00555 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1AO00555 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1AO00555 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CACNA1AO00555 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1AO00555 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.19■□□□□ 0.66
CACNA1AO00555 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1AO00555 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1AO00555 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.19■□□□□ 0.66
CACNA1AO00555 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNA1AO00555 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.19■□□□□ 0.66
CACNA1AO00555 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1AO00555 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CACNA1AO00555 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNA1AO00555 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.19■□□□□ 0.66
CACNA1AO00555 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1AO00555 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1AO00555 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1AO00555 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.19■□□□□ 0.66
CACNA1AO00555 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.19■□□□□ 0.66
CACNA1AO00555 AC239800.4-201ENST00000603712 296 ntBASIC19.19■□□□□ 0.66
CACNA1AO00555 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1AO00555 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CACNA1AO00555 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CACNA1AO00555 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CACNA1AO00555 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CACNA1AO00555 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CACNA1AO00555 AP002469.2-201ENST00000531724 424 ntBASIC19.18■□□□□ 0.66
CACNA1AO00555 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.18■□□□□ 0.66
CACNA1AO00555 AC141257.4-201ENST00000634557 245 ntBASIC19.18■□□□□ 0.66
CACNA1AO00555 AC136944.6-201ENST00000634818 245 ntBASIC19.18■□□□□ 0.66
CACNA1AO00555 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 AC137767.1-201ENST00000602918 1920 ntBASIC19.18■□□□□ 0.66
CACNA1AO00555 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.18■□□□□ 0.66
CACNA1AO00555 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CACNA1AO00555 EMBP1-201ENST00000458200 901 ntBASIC19.18■□□□□ 0.66
CACNA1AO00555 AL662844.1-201ENST00000546340 181 ntBASIC19.18■□□□□ 0.66
CACNA1AO00555 PRELID1P1-202ENST00000567272 903 ntBASIC19.18■□□□□ 0.66
CACNA1AO00555 AL031008.1-201ENST00000619963 541 ntBASIC19.18■□□□□ 0.66
CACNA1AO00555 AL031432.5-201ENST00000641059 760 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms