Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 HLA-G-202ENST00000376815 851 ntBASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 HLA-G-203ENST00000376818 1127 ntBASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 MTDHP1-201ENST00000605323 784 ntBASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AC239809.2-201ENST00000415381 517 ntBASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 FP700111.2-201ENST00000619190 1892 ntBASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 RPS2P4-201ENST00000476944 856 ntBASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 PRKY-204ENST00000533551 1019 ntBASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 MIR718-201ENST00000390190 70 ntBASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AC008550.1-201ENST00000511500 884 ntBASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.22■□□□□ 0.83
C1QTNF3-AMACRE9PGA6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms