Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM88BA6NKF7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM88BA6NKF7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TMEM88BA6NKF7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TMEM88BA6NKF7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 COX11P1-201ENST00000489116 835 ntBASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 AC097488.1-201ENST00000507834 756 ntBASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 AC026271.3-201ENST00000571884 352 ntBASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
TMEM88BA6NKF7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TMEM88BA6NKF7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TMEM88BA6NKF7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TMEM88BA6NKF7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.69■■□□□ 1.38
TMEM88BA6NKF7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TMEM88BA6NKF7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.68■■□□□ 1.38
TMEM88BA6NKF7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 B3GAT3P1-201ENST00000471720 806 ntBASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM88BA6NKF7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 AC093323.1-202ENST00000635031 2045 ntBASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 AC246785.2-201ENST00000432512 513 ntBASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.66■■□□□ 1.38
TMEM88BA6NKF7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 AC069148.1-201ENST00000608741 768 ntBASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms