Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LINC00565-201ENST00000562710 2331 ntBASIC17.81■□□□□ 0.44
MBD3L3A6NE82 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.81■□□□□ 0.44
MBD3L3A6NE82 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MBD3L3A6NE82 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.81■□□□□ 0.44
MBD3L3A6NE82 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 RARRES2P10-201ENST00000564312 460 ntBASIC17.8■□□□□ 0.44
MBD3L3A6NE82 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 AL031963.3-201ENST00000606441 850 ntBASIC17.8■□□□□ 0.44
MBD3L3A6NE82 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 AC006128.1-201ENST00000624704 1661 ntBASIC17.8■□□□□ 0.44
MBD3L3A6NE82 KRT8P20-201ENST00000423953 1409 ntBASIC17.8■□□□□ 0.44
MBD3L3A6NE82 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD3L3A6NE82 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 SNORA78-201ENST00000459373 127 ntBASIC17.79■□□□□ 0.44
MBD3L3A6NE82 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 AP001412.1-201ENST00000608405 714 ntBASIC17.79■□□□□ 0.44
MBD3L3A6NE82 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD3L3A6NE82 AC124283.5-201ENST00000624661 1809 ntBASIC17.79■□□□□ 0.44
MBD3L3A6NE82 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MBD3L3A6NE82 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 AC026310.3-201ENST00000625186 2373 ntBASIC17.77■□□□□ 0.44
MBD3L3A6NE82 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms