Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 AC019069.1-201ENST00000610008 1333 ntBASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 MIR638-201ENST00000385237 100 ntBASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 KRT19P1-201ENST00000405746 1186 ntBASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 AC138932.1-201ENST00000534164 6830 ntBASIC13.73□□□□□ -0.21
LINC00959A0A1B0GUT2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00959A0A1B0GUT2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 PGM5P4-201ENST00000421970 445 ntBASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 AC097381.1-201ENST00000429019 1296 ntBASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00959A0A1B0GUT2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00959A0A1B0GUT2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.71□□□□□ -0.22
LINC00959A0A1B0GUT2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00959A0A1B0GUT2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms