Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC007322.4-201ENST00000509611 723 ntBASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC137761.2-201ENST00000561729 223 ntBASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC145350.3-201ENST00000569033 163 ntBASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC087633.2-202ENST00000565166 1439 ntBASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TCF3P1-201ENST00000423021 1937 ntBASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AFG3L1P-217ENST00000557444 2447 ntBASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-8A0A0A6YYG3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 AC087623.3-201ENST00000607047 1098 ntBASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 AL356652.1-201ENST00000615962 565 ntBASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-8A0A0A6YYG3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV6-8A0A0A6YYG3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-8A0A0A6YYG3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14□□□□□ -0.17
TRBV6-8A0A0A6YYG3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-8A0A0A6YYG3 CYP21A1P-202ENST00000354927 1481 ntBASIC14□□□□□ -0.17
TRBV6-8A0A0A6YYG3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRBV6-8A0A0A6YYG3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV6-8A0A0A6YYG3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-8A0A0A6YYG3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14□□□□□ -0.17
TRBV6-8A0A0A6YYG3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms