Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
UBE4BO95155 AC026464.2-201ENST00000567834 2421 ntBASIC8.59□□□□□ -1.03
UBE4BO95155 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
UBE4BO95155 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.59□□□□□ -1.03
UBE4BO95155 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
UBE4BO95155 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
UBE4BO95155 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
UBE4BO95155 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.59□□□□□ -1.03
UBE4BO95155 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
UBE4BO95155 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
UBE4BO95155 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.59□□□□□ -1.03
UBE4BO95155 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
UBE4BO95155 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
UBE4BO95155 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC8.58□□□□□ -1.04
UBE4BO95155 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC8.58□□□□□ -1.04
UBE4BO95155 AL512882.1-201ENST00000436086 832 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.58□□□□□ -1.04
UBE4BO95155 AL590326.1-201ENST00000460857 334 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 RN7SL621P-201ENST00000472565 299 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 MTND6P19-201ENST00000519399 524 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.58□□□□□ -1.04
UBE4BO95155 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.58□□□□□ -1.04
UBE4BO95155 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 AP001636.1-201ENST00000531997 1122 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC8.58□□□□□ -1.04
UBE4BO95155 CARSP1-201ENST00000603171 889 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 AC008626.1-201ENST00000604384 255 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 pRNA.12-201ENST00000614353 90 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 pRNA.3-201ENST00000615048 90 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 AC010653.3-201ENST00000635332 232 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 AC145138.1-201ENST00000512908 2851 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 AC016582.1-202ENST00000636341 2982 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 AC138627.1-203ENST00000641872 1680 ntBASIC8.58□□□□□ -1.04
UBE4BO95155 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.58□□□□□ -1.04
UBE4BO95155 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
UBE4BO95155 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
UBE4BO95155 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC8.57□□□□□ -1.04
UBE4BO95155 RN7SKP76-201ENST00000364419 323 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 SSX9-201ENST00000376909 591 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 SNORA10-201ENST00000384084 133 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
UBE4BO95155 RAN-201ENST00000392367 780 ntTSL 5 BASIC8.57□□□□□ -1.04
UBE4BO95155 IL6-202ENST00000401630 765 ntTSL 5 BASIC8.57□□□□□ -1.04
UBE4BO95155 RPL19P21-201ENST00000424919 591 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 GAPDHP32-201ENST00000433816 998 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC8.57□□□□□ -1.04
UBE4BO95155 AP006193.1-201ENST00000440724 485 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.57□□□□□ -1.04
UBE4BO95155 AL135929.1-201ENST00000449287 552 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC8.57□□□□□ -1.04
UBE4BO95155 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC8.57□□□□□ -1.04
UBE4BO95155 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC8.57□□□□□ -1.04
UBE4BO95155 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC8.57□□□□□ -1.04
UBE4BO95155 AC008870.2-201ENST00000568262 1024 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC8.57□□□□□ -1.04
UBE4BO95155 AC090699.1-201ENST00000586264 321 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC8.57□□□□□ -1.04
UBE4BO95155 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.57□□□□□ -1.04
UBE4BO95155 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.57□□□□□ -1.04
UBE4BO95155 KDM5DP1-201ENST00000622542 298 ntBASIC8.57□□□□□ -1.04
UBE4BO95155 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.57□□□□□ -1.04
UBE4BO95155 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
UBE4BO95155 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.57□□□□□ -1.04
UBE4BO95155 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
UBE4BO95155 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms