Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AL161454.1-201ENST00000446226 569 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AC013787.1-201ENST00000460165 307 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 RN7SL12P-201ENST00000473849 290 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AC009108.1-201ENST00000473913 796 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 RN7SL335P-201ENST00000482790 304 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 BTF3P1-201ENST00000522014 495 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 UBE2CP1-201ENST00000557130 554 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AC008626.1-201ENST00000604384 255 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AL356052.1-201ENST00000605764 376 ntBASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC8.35□□□□□ -1.07
LMO3Q8TAP4 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 RIT1-201ENST00000368322 855 ntTSL 3 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 FBP2P1-202ENST00000424473 530 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC123904.1-201ENST00000441072 368 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC018738.1-201ENST00000441378 210 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AL021939.1-201ENST00000441868 886 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC107983.1-201ENST00000442562 210 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AL024493.1-201ENST00000449217 833 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC093063.1-201ENST00000599317 363 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC114810.1-201ENST00000607415 473 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AC069499.2-201ENST00000610665 382 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.34□□□□□ -1.07
LMO3Q8TAP4 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LMO3Q8TAP4 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
LMO3Q8TAP4 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.34□□□□□ -1.08
LMO3Q8TAP4 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
LMO3Q8TAP4 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
LMO3Q8TAP4 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
LMO3Q8TAP4 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 RNA5SP463-201ENST00000363030 120 ntBASIC8.33□□□□□ -1.08
LMO3Q8TAP4 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LMO3Q8TAP4 IL6-202ENST00000401630 765 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms