Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DDX11L16-201ENST00000507418 1306 ntBASIC8.26□□□□□ -1.09
SLC1A1P43005 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SLC1A1P43005 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
SLC1A1P43005 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 H2AFZP3-201ENST00000394213 387 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.25□□□□□ -1.09
SLC1A1P43005 IL6-202ENST00000401630 765 ntTSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 VDAC1P8-201ENST00000406025 853 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.25□□□□□ -1.09
SLC1A1P43005 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC8.25□□□□□ -1.09
SLC1A1P43005 AL022721.1-201ENST00000436521 505 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 RN7SL571P-201ENST00000468302 295 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 AC098583.2-201ENST00000504151 372 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 AC073648.1-201ENST00000508957 930 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 OR7E85P-201ENST00000512164 985 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 BTF3P1-201ENST00000522014 495 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC8.25□□□□□ -1.09
SLC1A1P43005 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.25□□□□□ -1.09
SLC1A1P43005 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.25□□□□□ -1.09
SLC1A1P43005 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC8.25□□□□□ -1.09
SLC1A1P43005 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 AC138761.2-201ENST00000583878 343 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 SNX29P2-204ENST00000603801 875 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 AL512662.1-201ENST00000624850 2251 ntBASIC8.25□□□□□ -1.09
SLC1A1P43005 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SLC1A1P43005 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.25□□□□□ -1.09
SLC1A1P43005 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
SLC1A1P43005 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.25□□□□□ -1.09
SLC1A1P43005 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.24□□□□□ -1.09
SLC1A1P43005 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
SLC1A1P43005 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC8.24□□□□□ -1.09
SLC1A1P43005 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 OR11G2-201ENST00000357366 1038 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 SNORA71D-201ENST00000363484 134 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 RNA5SP185-201ENST00000390963 114 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 RNA5SP23-201ENST00000391006 105 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 AC234778.1-201ENST00000399253 370 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 OR13D3P-201ENST00000412501 937 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.24□□□□□ -1.09
SLC1A1P43005 RPL26P34-201ENST00000431005 451 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.24□□□□□ -1.09
SLC1A1P43005 SAP18P3-201ENST00000449663 396 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 AC092569.1-201ENST00000455192 258 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 NDUFS5P2-201ENST00000484004 306 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC116353.1-201ENST00000489727 316 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 AC233724.1-201ENST00000503894 233 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC8.24□□□□□ -1.09
SLC1A1P43005 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC8.24□□□□□ -1.09
SLC1A1P43005 IGHVIII-82-201ENST00000522058 250 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC8.24□□□□□ -1.09
SLC1A1P43005 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC140658.6-201ENST00000603958 201 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC8.24□□□□□ -1.09
SLC1A1P43005 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC119674.1-221ENST00000641594 1213 ntBASIC8.24□□□□□ -1.09
SLC1A1P43005 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.24□□□□□ -1.09
SLC1A1P43005 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.24□□□□□ -1.09
SLC1A1P43005 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.24□□□□□ -1.09
SLC1A1P43005 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SLC1A1P43005 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
SLC1A1P43005 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.23□□□□□ -1.09
SLC1A1P43005 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms