Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 TMED5-201ENST00000370280 750 ntTSL 2 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 SNORA7B-201ENST00000384360 139 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 OR9I2P-201ENST00000427941 903 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ATP5G1P5-201ENST00000429024 411 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 AC068137.1-201ENST00000429272 584 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 CTBP2P1-201ENST00000431853 245 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 EIF3IP1-201ENST00000433048 967 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 RN7SL496P-201ENST00000470372 290 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 OR4N1P-201ENST00000554847 949 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 AL136304.1-201ENST00000607790 509 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 AC103974.2-201ENST00000611319 778 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 AC123788.2-201ENST00000612290 283 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 MIR193BHG-210ENST00000641327 515 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 AC245505.2-201ENST00000553572 3055 ntBASIC8.43□□□□□ -1.06
LMO3Q8TAP4 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 THAP12P1-201ENST00000398672 2203 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 RNA5SP23-201ENST00000391006 105 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 PHBP1-201ENST00000392260 808 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 VDAC1P8-201ENST00000406025 853 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 RBMY2FP-202ENST00000420346 1263 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 AC017007.3-201ENST00000479865 435 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 AC009269.2-201ENST00000559892 474 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 YTHDF2P1-201ENST00000604759 1271 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 MFSD8-243ENST00000641695 1455 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 AC007126.1-201ENST00000508202 4781 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 AC008498.2-201ENST00000624033 2322 ntBASIC8.42□□□□□ -1.06
LMO3Q8TAP4 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LMO3Q8TAP4 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AC096745.2-201ENST00000627783 1914 ntBASIC8.41□□□□□ -1.06
LMO3Q8TAP4 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 OR9K2-201ENST00000305377 1122 ntBASIC8.41□□□□□ -1.06
LMO3Q8TAP4 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 OLA1P1-201ENST00000396387 1189 ntBASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC8.41□□□□□ -1.06
LMO3Q8TAP4 AC234782.3-201ENST00000461229 433 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms