Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AP001342.1-201ENST00000423389 525 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL441943.1-201ENST00000435539 432 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL049648.1-201ENST00000443692 282 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 RN7SL519P-201ENST00000497925 288 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 IGKV3-34-201ENST00000521692 293 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 FTH1-207ENST00000532601 742 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 MIR4262-201ENST00000578394 54 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 MIR3714-201ENST00000579507 65 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AF186192.2-204ENST00000581667 524 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC139085.1-201ENST00000582716 182 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC093063.1-201ENST00000599317 363 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC008626.1-201ENST00000604384 255 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC108724.2-201ENST00000634593 290 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 CFI-207ENST00000618244 1345 ntTSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 EEF1A1P11-201ENST00000415278 1389 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 CCT5P1-201ENST00000502314 1618 ntBASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.41□□□□□ -1.22
NPIPA3F8WFD2 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC068044.1-201ENST00000441585 1978 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AL138847.1-201ENST00000258651 546 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 APOM-202ENST00000375918 922 ntTSL 2 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 CST13P-201ENST00000376992 428 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 PCNAP3-201ENST00000397222 778 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 MED15P8-201ENST00000411601 545 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AL031282.1-204ENST00000418950 497 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 RPL12P4-201ENST00000432629 497 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AL591438.2-201ENST00000452635 691 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC108039.1-201ENST00000456719 609 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AF186996.1-201ENST00000466578 1015 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 RPL12P32-201ENST00000484010 494 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 RN7SL464P-201ENST00000492743 297 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 OR4C7P-201ENST00000533375 919 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 RN7SL3-201ENST00000610674 299 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC106782.6-201ENST00000611264 512 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 RBM22P4-201ENST00000613117 1240 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 MED15P6-202ENST00000621415 787 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AC079456.1-201ENST00000624010 480 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 AL353608.4-201ENST00000624487 1188 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 PACRG-AS2-201ENST00000418665 1300 ntTSL 2 BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 DDX11L16-201ENST00000507418 1306 ntBASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPIPA3F8WFD2 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPIPA3F8WFD2 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms