Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KCNE3Q9Y6H6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KCNE3Q9Y6H6 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.81■□□□□ 0.6
KCNE3Q9Y6H6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNE3Q9Y6H6 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.81■□□□□ 0.6
KCNE3Q9Y6H6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.81■□□□□ 0.6
KCNE3Q9Y6H6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 AC231657.2-201ENST00000624556 255 ntBASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 TCF3P1-201ENST00000423021 1937 ntBASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNE3Q9Y6H6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 AL355472.2-201ENST00000422958 438 ntBASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNE3Q9Y6H6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNE3Q9Y6H6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 MCRIP2P1-201ENST00000394346 511 ntBASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 PGM5P4-201ENST00000421970 445 ntBASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 AC080038.1-201ENST00000611274 1154 ntBASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KCNE3Q9Y6H6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNE3Q9Y6H6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNE3Q9Y6H6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNE3Q9Y6H6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNE3Q9Y6H6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNE3Q9Y6H6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNE3Q9Y6H6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNE3Q9Y6H6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 AC093787.1-201ENST00000450396 207 ntBASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 AC100791.3-201ENST00000617619 330 ntBASIC18.76■□□□□ 0.59
KCNE3Q9Y6H6 AC073111.5-205ENST00000641717 521 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms