Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CLIC4Q9Y696 AC125437.2-201ENST00000625180 2167 ntBASIC23.08■■□□□ 1.29
CLIC4Q9Y696 AC068338.2-201ENST00000563278 1430 ntBASIC23.08■■□□□ 1.29
CLIC4Q9Y696 AL691432.2-201ENST00000607222 2038 ntBASIC23.08■■□□□ 1.29
CLIC4Q9Y696 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLIC4Q9Y696 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.08■■□□□ 1.29
CLIC4Q9Y696 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLIC4Q9Y696 AC016769.1-201ENST00000409132 1010 ntBASIC23.08■■□□□ 1.29
CLIC4Q9Y696 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.08■■□□□ 1.29
CLIC4Q9Y696 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLIC4Q9Y696 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.08■■□□□ 1.29
CLIC4Q9Y696 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.08■■□□□ 1.29
CLIC4Q9Y696 AL162412.1-201ENST00000567129 965 ntBASIC23.08■■□□□ 1.29
CLIC4Q9Y696 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.08■■□□□ 1.29
CLIC4Q9Y696 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.08■■□□□ 1.29
CLIC4Q9Y696 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.08■■□□□ 1.28
CLIC4Q9Y696 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLIC4Q9Y696 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLIC4Q9Y696 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CLIC4Q9Y696 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CLIC4Q9Y696 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.08■■□□□ 1.28
CLIC4Q9Y696 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 AL162430.1-201ENST00000480705 870 ntBASIC23.07■■□□□ 1.28
CLIC4Q9Y696 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.07■■□□□ 1.28
CLIC4Q9Y696 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC4Q9Y696 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.06■■□□□ 1.28
CLIC4Q9Y696 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 BX119927.1-201ENST00000636596 1552 ntBASIC23.05■■□□□ 1.28
CLIC4Q9Y696 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC4Q9Y696 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms