Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA3Q9Y5H0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 LINC01521-201ENST00000504184 1943 ntBASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA3Q9Y5H0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 AL157384.1-201ENST00000445995 2473 ntBASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGA3Q9Y5H0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA3Q9Y5H0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHGA3Q9Y5H0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGA3Q9Y5H0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA3Q9Y5H0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA3Q9Y5H0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA3Q9Y5H0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA3Q9Y5H0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGA3Q9Y5H0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 RPPH1-201ENST00000516869 333 ntBASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 RN7SL471P-201ENST00000580476 299 ntBASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 AC105020.6-201ENST00000621523 1217 ntBASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA3Q9Y5H0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 MIR718-201ENST00000390190 70 ntBASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA3Q9Y5H0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms