Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 AC020907.5-201ENST00000624372 1936 ntBASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 PGM5P4-201ENST00000421970 445 ntBASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 AL121603.2-201ENST00000557373 2117 ntBASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB1Q9Y5F3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
PCDHB1Q9Y5F3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB1Q9Y5F3 AC092720.2-201ENST00000602388 1665 ntBASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 RPS2P4-201ENST00000476944 856 ntBASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 KRT8P36-201ENST00000489121 1440 ntBASIC20.19■□□□□ 0.82
PCDHB1Q9Y5F3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB1Q9Y5F3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 AC100791.3-201ENST00000617619 330 ntBASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB1Q9Y5F3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms